BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_H03
(896 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF203336-1|AAF19831.1| 187|Anopheles gambiae immune-responsive ... 25 2.4
AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant r... 24 5.5
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 24 7.2
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 23 9.5
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 23 9.5
>AF203336-1|AAF19831.1| 187|Anopheles gambiae immune-responsive
chymotrypsin-likeserine protease-related protein ISPR1
protein.
Length = 187
Score = 25.4 bits (53), Expect = 2.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 100 MLHSSIMLLLLCVSISTSAPADSPI 174
++H +LL CVS +++P D PI
Sbjct: 9 VVHIIFAILLACVSRGSASPIDHPI 33
>AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant
receptor Or3 protein.
Length = 411
Score = 24.2 bits (50), Expect = 5.5
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 608 LTTLDTPSAPPTMTLPAL*NLSPVLPYFSDSLIVSTMGLG*NIPATTFCMFS-FTDKVLL 432
+T+ TP TM LP L + + V+P+ ++ + + + +FS F V+L
Sbjct: 9 ITSFGTPQDKRTMVLPKLKDETAVMPFLLQIQTIAGLWGDRSQRYRFYLIFSYFCAMVVL 68
Query: 431 PK 426
PK
Sbjct: 69 PK 70
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.8 bits (49), Expect = 7.2
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +1
Query: 286 NFISNKLQSSTKFISNKIETQVKAL 360
N+I L ++ KF+ NK+ +Q+ ++
Sbjct: 1062 NWIKMNLANALKFVKNKLTSQIASV 1086
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.4 bits (48), Expect = 9.5
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 1/109 (0%)
Frame = +1
Query: 301 KLQSSTKFIS-NKIETQVKALNFGGPFASRTSTLESAVPETEGFGSKTLSVKENIQNVVA 477
KL+ T+ ++ TQ +F P + L S + FG + +K Q +++
Sbjct: 277 KLRKETELRRLERLSTQRTKRDFH-PTGCSLNNLLSTNRKVYEFGLEHEGLKPPSQIILS 335
Query: 478 GIFQPKPIVDTISESEKYGNTGDKFYSAGKVIVGGAEGVSNVVNSVLEI 624
IF ++ N FY + GG++ N LE+
Sbjct: 336 TIFLVTDVLSEFYNRRIAANANGLFYDRAGSVPGGSDSAPPKSNPPLEV 384
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.4 bits (48), Expect = 9.5
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 1/109 (0%)
Frame = +1
Query: 301 KLQSSTKFIS-NKIETQVKALNFGGPFASRTSTLESAVPETEGFGSKTLSVKENIQNVVA 477
KL+ T+ ++ TQ +F P + L S + FG + +K Q +++
Sbjct: 277 KLRKETELRRLERLSTQRTKRDFH-PTGCSLNNLLSTNRKVYEFGLEHEGLKPPSQIILS 335
Query: 478 GIFQPKPIVDTISESEKYGNTGDKFYSAGKVIVGGAEGVSNVVNSVLEI 624
IF ++ N FY + GG++ N LE+
Sbjct: 336 TIFLVTDVLSEFYNRRIAANANGLFYDRAGSVPGGSDSAPPKSNPPLEV 384
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,279
Number of Sequences: 2352
Number of extensions: 17197
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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