Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_H01
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0991 + 33634334-33634454,33634656-33634939,33636250-336367...    35   0.075
04_04_1095 - 30839573-30839769,30839817-30839964,30840421-308409...    32   0.70 
06_03_0395 - 20354713-20355570                                         29   3.7  
03_04_0013 + 16436438-16436536,16437257-16437742,16437791-164378...    29   3.7  
07_03_1507 - 27228032-27228742                                         29   4.9  
03_04_0011 + 16398093-16398170,16401321-16401806,16401892-164023...    28   8.6  
01_04_0082 + 15835137-15836312                                         28   8.6  

>01_06_0991 +
           33634334-33634454,33634656-33634939,33636250-33636795,
           33643361-33643966
          Length = 518

 Score = 35.1 bits (77), Expect = 0.075
 Identities = 26/98 (26%), Positives = 49/98 (50%)
 Frame = +1

Query: 526 VEEGEGAVCGIYFSFANISDNSDDFGLRLEEIHRRVHPRLQVVQVVLWAHVGTPEGPVER 705
           + E EG + G+YF+ AN     + F   L   + ++       +V+    V   E     
Sbjct: 160 ISELEGKIIGLYFA-ANWYPKCEAFTPALTAAYHQLKEHGAGFEVIF---VSCDENRPSF 215

Query: 706 EAGFYKSLMGKPWFAVPYHDVDIKRRLTQKYSIAVGVP 819
           E  F++++   PW AVP+ D+  K+RL++++ +  G+P
Sbjct: 216 ER-FHRAM---PWPAVPFGDIGCKKRLSERFQVE-GIP 248


>04_04_1095 -
           30839573-30839769,30839817-30839964,30840421-30840903,
           30841419-30841910,30842267-30842362
          Length = 471

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 706 EAGFYKSLMGKPWFAVPYHDVDIKRRLTQKYSIAVGVP 819
           E  F  SL   PWFA+PY D  + + L++ ++I  G+P
Sbjct: 252 EEEFQASLSAMPWFAIPYSDTTV-QELSRIFTIK-GIP 287


>06_03_0395 - 20354713-20355570
          Length = 285

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 748 QTTAFPSDSCRNQPLSPPDLQVYRHEPTTQLEQLAA 641
           QT A PS S   QP +   +   R +PTTQ+   AA
Sbjct: 80  QTAAAPSPSTTKQPATAAAVTNRRRQPTTQIRPRAA 115


>03_04_0013 +
           16436438-16436536,16437257-16437742,16437791-16437826,
           16437835-16438323,16438951-16439622
          Length = 593

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 739 PWFAVPYHDVDIKRRLTQKYSIAVGVP 819
           PW AVP+ D +   +L ++Y + +G+P
Sbjct: 99  PWLAVPFSDSEALAKLNERYKV-MGIP 124


>07_03_1507 - 27228032-27228742
          Length = 236

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 754 AQQTTAFPSDSC-RNQPLSPPDLQVYRHEPTT 662
           A + +  PSDSC R  PLSPP    +   PT+
Sbjct: 35  AARRSLSPSDSCSRRAPLSPPSPSTFGSPPTS 66


>03_04_0011 +
           16398093-16398170,16401321-16401806,16401892-16402380,
           16402810-16403466
          Length = 569

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +1

Query: 739 PWFAVPYHDVDIKRRLTQKYSIAVGVP 819
           PW AVP+ D + + +L +++ +  G+P
Sbjct: 92  PWLAVPFSDSECRAKLNKRFKVR-GIP 117


>01_04_0082 + 15835137-15836312
          Length = 391

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = -3

Query: 395 DRHNLLAKRGLWFICLFSNARLAYRSFSLFSFKLTK-AETLLTFLKFV 255
           D  +L  +RGL F+C F+  RL   S+SL + KLTK  + L  +L +V
Sbjct: 326 DIQSLDLERGLVFLCHFAAERLL--SYSLSTGKLTKIRDGLRRYLYYV 371


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,542,078
Number of Sequences: 37544
Number of extensions: 431182
Number of successful extensions: 1044
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)