Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_G24
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0955 + 22867448-22868248                                         35   0.076
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13...    32   0.71 

>07_03_0955 + 22867448-22868248
          Length = 266

 Score = 35.1 bits (77), Expect = 0.076
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -2

Query: 397 AQVTITDLPEALPLIRLNINENKSKIGSMGGYATAESLIWGD 272
           A   ++DLP ALP +R N + N   + + GG  +   L WGD
Sbjct: 122 AHAVLSDLPAALPNLRHNASLNAPLLDARGGSVSVVPLPWGD 163


>06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-133271,
            133389-133448,133536-133588,133671-133837,133963-134167,
            134989-135046,135225-135281,135363-135608,135938-136002,
            136090-136158,136238-136331,136467-136607,137159-137304,
            137452-138110,138222-138335,138406-138560
          Length = 1163

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -2

Query: 397  AQVTITDLPEALPLIRLNINENKSKIGSMGGYATAESLIWGD 272
            A V +TDLP+ L L+R NI+ N        G A    L+W D
Sbjct: 1022 AHVLLTDLPDRLKLLRKNIDLNVG--DDARGSARVAQLVWAD 1061


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,191,290
Number of Sequences: 37544
Number of extensions: 374930
Number of successful extensions: 828
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)