Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_G19
         (865 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu...    38   0.33 
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=...    36   1.0  
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ...    36   1.7  
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n...    36   1.7  
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F...    36   1.7  
UniRef50_Q5DEI3 Cluster: SJCHGC09342 protein; n=1; Schistosoma j...    35   3.1  
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=...    34   4.0  
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|...    34   5.3  
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=...    34   5.3  
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=...    34   5.3  
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;...    33   7.1  

>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
           Eukaryota|Rep: ATP-dependent RNA helicase p62 -
           Drosophila melanogaster (Fruit fly)
          Length = 719

 Score = 37.9 bits (84), Expect = 0.33
 Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -2

Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
           TD    GL + G K    F YP  SE YIH IGR    N KG    F+
Sbjct: 587 TDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFF 634



 Score = 33.5 bits (73), Expect = 7.1
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -3

Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
           FFT +N++QA  LV  L+E  Q I+P L+++A
Sbjct: 633 FFTKNNAKQAKALVDVLREANQEINPALENLA 664


>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
           Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
           Aedes aegypti (Yellowfever mosquito)
          Length = 718

 Score = 36.3 bits (80), Expect = 1.0
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -3

Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
           FFTP+N  +A DL+  L+E  Q ++P+L+  A
Sbjct: 451 FFTPANGAKAGDLIGVLREANQFVNPELEQYA 482


>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
           Eukaryota|Rep: Ethylene-responsive RNA helicase -
           Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
          Length = 474

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = -3

Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSM 615
           FFT +N+R A DLV+ L+E  Q +SP+L  M
Sbjct: 417 FFTAANARFAKDLVNILEEAGQKVSPELAKM 447


>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
           Plasmodium|Rep: ATP-dependent RNA helicase, putative -
           Plasmodium vivax
          Length = 717

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = -2

Query: 780 PNXSEXYIHXIGRLDVPNXKGXHMXFYPFKF--PSSXRFGIXFTRXLS 643
           PN  E YIH IGR      KG  + F+P+ +  P   RF     + LS
Sbjct: 652 PNTIEDYIHRIGRTGRAGQKGRAVLFFPYDYYVPQKGRFARDLVKLLS 699


>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
           Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
           - Gibberella zeae (Fusarium graminearum)
          Length = 555

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = -3

Query: 713 IXFFTPSNSRQAXDLVSXLQEXYQMISPQLQSM 615
           I  FT  N +QA DLV+ LQE  Q I P+L  M
Sbjct: 482 ITLFTTDNQKQARDLVNVLQEAKQQIDPRLVEM 514


>UniRef50_Q5DEI3 Cluster: SJCHGC09342 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09342 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 224

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -3

Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
           FFT  N+RQA DL+  L E  Q I+P+L  +A
Sbjct: 53  FFTYKNARQARDLIEILDEANQEITPELIQLA 84


>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
           Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
           Aedes aegypti (Yellowfever mosquito)
          Length = 699

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = -3

Query: 704 FTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
           FT SN+ +A DL++ L+E  Q+I+P+L  MA
Sbjct: 473 FTNSNANKAGDLINVLREANQVINPKLAEMA 503


>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
           melanogaster|Rep: GH10652p - Drosophila melanogaster
           (Fruit fly)
          Length = 818

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -3

Query: 704 FTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
           FT SN+ +A DL+  L+E  Q I+P+L +MA
Sbjct: 508 FTHSNANKANDLIQVLREANQTINPKLMNMA 538


>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
           Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
           Aedes aegypti (Yellowfever mosquito)
          Length = 639

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = -3

Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSM 615
           FFTP N+ +A +L+  L+E  Q+I+P+L  M
Sbjct: 437 FFTPDNAGRARELIDVLKEAKQVINPKLLDM 467


>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
           Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
           Aedes aegypti (Yellowfever mosquito)
          Length = 911

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -3

Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
           FFTP N RQA +L+S L+E  Q  + QL  +A
Sbjct: 581 FFTPGNGRQARELLSVLEEAGQQPTAQLIDLA 612


>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
           n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
           30 - Oryza sativa subsp. japonica (Rice)
          Length = 666

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = -3

Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
           FFT SN++ + +LV  L+E  Q+++P L+SMA
Sbjct: 599 FFTLSNAKFSRNLVKILREAGQVVNPALESMA 630


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,920,823
Number of Sequences: 1657284
Number of extensions: 7511612
Number of successful extensions: 10327
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10323
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)