Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_G19
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826...    33   0.22 
03_01_0031 + 292335-292844                                             30   2.7  
06_03_0752 - 24171847-24174321                                         29   6.3  
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249...    28   8.4  

>01_06_1758 -
           39681942-39682030,39682115-39682345,39682643-39682679,
           39683604-39683835,39683937-39684022,39684126-39684218,
           39684302-39684465,39684541-39684702,39684783-39684962,
           39685079-39685515,39685614-39685669
          Length = 588

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = -3

Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
           FFT SN++ + +LV  L+E  Q+++P L+SMA
Sbjct: 521 FFTLSNAKFSRNLVKILREAGQVVNPALESMA 552


>03_01_0031 + 292335-292844
          Length = 169

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -1

Query: 643 R*LAHNCSRWPTXSVVXAAGGTGTDSA 563
           R LA    RWPT SV   A G+G D A
Sbjct: 131 RQLAGGVGRWPTTSVAGVAAGSGGDRA 157


>06_03_0752 - 24171847-24174321
          Length = 824

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/54 (24%), Positives = 22/54 (40%)
 Frame = -1

Query: 823 GLXVXGXXXVXILVSQXVXGLHPXYWETGRSKSKGXSYXFLPLQIPVKPKIWYL 662
           GL V G   + + +        P  W +  +  +G     +  +  V PK+WYL
Sbjct: 185 GLKVRGELMLAVWIGTQADEAFPEAWHSDAATVRGEGVASVRSKAYVSPKLWYL 238


>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
            27125387-27125656,27126027-27126377,27126480-27126757,
            27126887-27128330
          Length = 1398

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 707  FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
            FF+  + + A DLV  L+   Q + P+LQ MA
Sbjct: 951  FFSEQDWKYAGDLVKVLEGANQHVPPELQEMA 982


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,232,698
Number of Sequences: 37544
Number of extensions: 202801
Number of successful extensions: 315
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)