Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_G19
(865 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97056-3|CAB09792.1| 650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) bo... 38 0.062
U59321-1|AAC50787.1| 650|Homo sapiens DEAD-box protein p72 prot... 38 0.062
CR456432-1|CAG30318.1| 652|Homo sapiens DDX17 protein. 38 0.062
BC000595-1|AAH00595.2| 729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 38 0.062
AB209595-1|BAD92832.1| 737|Homo sapiens DEAD box polypeptide 17... 38 0.062
X52104-1|CAA36324.1| 614|Homo sapiens protein ( Human mRNA for ... 37 0.11
X15729-1|CAA33751.1| 614|Homo sapiens protein ( Human mRNA for ... 37 0.11
BT006943-1|AAP35589.1| 614|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 37 0.11
BC016027-1|AAH16027.1| 614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 37 0.11
AF015812-1|AAB84094.1| 614|Homo sapiens RNA helicase p68 protein. 37 0.11
>Z97056-3|CAB09792.1| 650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 17 protein.
Length = 650
Score = 37.5 bits (83), Expect = 0.062
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMAD 609
FFTP N +QA +L+ L+E Q I+P+L + D
Sbjct: 442 FFTPGNLKQARELIKVLEEANQAINPKLMQLVD 474
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + K + YPN SE Y+H IGR KG F+
Sbjct: 396 TDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFF 443
>U59321-1|AAC50787.1| 650|Homo sapiens DEAD-box protein p72
protein.
Length = 650
Score = 37.5 bits (83), Expect = 0.062
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMAD 609
FFTP N +QA +L+ L+E Q I+P+L + D
Sbjct: 442 FFTPGNLKQARELIKVLEEANQAINPKLMQLVD 474
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + K + YPN SE Y+H IGR KG F+
Sbjct: 396 TDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFF 443
>CR456432-1|CAG30318.1| 652|Homo sapiens DDX17 protein.
Length = 652
Score = 37.5 bits (83), Expect = 0.062
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMAD 609
FFTP N +QA +L+ L+E Q I+P+L + D
Sbjct: 442 FFTPGNLKQARELIKVLEEANQAINPKLMQLVD 474
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + K + YPN SE Y+H IGR KG F+
Sbjct: 396 TDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFF 443
>BC000595-1|AAH00595.2| 729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 17 protein.
Length = 729
Score = 37.5 bits (83), Expect = 0.062
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMAD 609
FFTP N +QA +L+ L+E Q I+P+L + D
Sbjct: 521 FFTPGNLKQARELIKVLEEANQAINPKLMQLVD 553
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + K + YPN SE Y+H IGR KG F+
Sbjct: 475 TDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFF 522
>AB209595-1|BAD92832.1| 737|Homo sapiens DEAD box polypeptide 17
isoform p82 variant protein.
Length = 737
Score = 37.5 bits (83), Expect = 0.062
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMAD 609
FFTP N +QA +L+ L+E Q I+P+L + D
Sbjct: 523 FFTPGNLKQARELIKVLEEANQAINPKLMQLVD 555
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + K + YPN SE Y+H IGR KG F+
Sbjct: 477 TDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFF 524
>X52104-1|CAA36324.1| 614|Homo sapiens protein ( Human mRNA for p68
protein. ).
Length = 614
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMAD 609
FFTP+N +Q DL+S L+E Q I+P+L + +
Sbjct: 444 FFTPNNIKQVSDLISVLREANQAINPKLLQLVE 476
>X15729-1|CAA33751.1| 614|Homo sapiens protein ( Human mRNA for
nuclear p68 protein. ).
Length = 614
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMAD 609
FFTP+N +Q DL+S L+E Q I+P+L + +
Sbjct: 444 FFTPNNIKQVSDLISVLREANQAINPKLLQLVE 476
>BT006943-1|AAP35589.1| 614|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase,
68kDa) protein.
Length = 614
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMAD 609
FFTP+N +Q DL+S L+E Q I+P+L + +
Sbjct: 444 FFTPNNIKQVSDLISVLREANQAINPKLLQLVE 476
>BC016027-1|AAH16027.1| 614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 5 protein.
Length = 614
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMAD 609
FFTP+N +Q DL+S L+E Q I+P+L + +
Sbjct: 444 FFTPNNIKQVSDLISVLREANQAINPKLLQLVE 476
>AF015812-1|AAB84094.1| 614|Homo sapiens RNA helicase p68 protein.
Length = 614
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMAD 609
FFTP+N +Q DL+S L+E Q I+P+L + +
Sbjct: 444 FFTPNNIKQVSDLISVLREANQAINPKLLQLVE 476
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,016,270
Number of Sequences: 237096
Number of extensions: 1109455
Number of successful extensions: 1290
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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