Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_G19
(865 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52846-1|CAA37037.1| 575|Drosophila melanogaster protein ( Dros... 38 0.018
BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p pro... 38 0.018
BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p pro... 38 0.018
BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p pro... 38 0.018
AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF... 38 0.018
AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC... 38 0.018
AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB... 38 0.018
AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE... 38 0.018
AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD... 38 0.018
AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA... 38 0.018
AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p pro... 34 0.29
AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-P... 34 0.29
AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p pro... 33 0.67
AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-P... 33 0.67
>X52846-1|CAA37037.1| 575|Drosophila melanogaster protein (
Drosophila melanogasterRM62 mRNA for novel RNA helicase.
).
Length = 575
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + G K F YP SE YIH IGR N KG F+
Sbjct: 443 TDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFF 490
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FFT +N++QA LV L+E Q I+P L+++A
Sbjct: 489 FFTKNNAKQAKALVDVLREANQEINPALENLA 520
>BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p
protein.
Length = 575
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + G K F YP SE YIH IGR N KG F+
Sbjct: 443 TDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFF 490
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FFT +N++QA LV L+E Q I+P L+++A
Sbjct: 489 FFTKNNAKQAKALVDVLREANQEINPALENLA 520
>BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p
protein.
Length = 719
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + G K F YP SE YIH IGR N KG F+
Sbjct: 587 TDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFF 634
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FFT +N++QA LV L+E Q I+P L+++A
Sbjct: 633 FFTKNNAKQAKALVDVLREANQEINPALENLA 664
>BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p
protein.
Length = 578
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + G K F YP SE YIH IGR N KG F+
Sbjct: 446 TDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFF 493
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FFT +N++QA LV L+E Q I+P L+++A
Sbjct: 492 FFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF,
isoform F protein.
Length = 578
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + G K F YP SE YIH IGR N KG F+
Sbjct: 446 TDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFF 493
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FFT +N++QA LV L+E Q I+P L+++A
Sbjct: 492 FFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC,
isoform C protein.
Length = 578
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + G K F YP SE YIH IGR N KG F+
Sbjct: 446 TDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFF 493
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FFT +N++QA LV L+E Q I+P L+++A
Sbjct: 492 FFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB,
isoform B protein.
Length = 578
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + G K F YP SE YIH IGR N KG F+
Sbjct: 446 TDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFF 493
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FFT +N++QA LV L+E Q I+P L+++A
Sbjct: 492 FFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE,
isoform E protein.
Length = 578
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + G K F YP SE YIH IGR N KG F+
Sbjct: 446 TDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFF 493
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FFT +N++QA LV L+E Q I+P L+++A
Sbjct: 492 FFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD,
isoform D protein.
Length = 575
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + G K F YP SE YIH IGR N KG F+
Sbjct: 443 TDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFF 490
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FFT +N++QA LV L+E Q I+P L+++A
Sbjct: 489 FFTKNNAKQAKALVDVLREANQEINPALENLA 520
>AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA,
isoform A protein.
Length = 719
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKGXHMXFY 700
TD GL + G K F YP SE YIH IGR N KG F+
Sbjct: 587 TDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFF 634
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FFT +N++QA LV L+E Q I+P L+++A
Sbjct: 633 FFTKNNAKQAKALVDVLREANQEINPALENLA 664
>AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p
protein.
Length = 818
Score = 33.9 bits (74), Expect = 0.29
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -3
Query: 704 FTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FT SN+ +A DL+ L+E Q I+P+L +MA
Sbjct: 508 FTHSNANKANDLIQVLREANQTINPKLMNMA 538
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKG 718
TD GL + K + YP+ SE Y+H IGR N G
Sbjct: 461 TDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTG 502
>AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-PA,
isoform A protein.
Length = 818
Score = 33.9 bits (74), Expect = 0.29
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -3
Query: 704 FTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FT SN+ +A DL+ L+E Q I+P+L +MA
Sbjct: 508 FTHSNANKANDLIQVLREANQTINPKLMNMA 538
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 840 TDFQLGGLXLXGXKXX-KFWYPNXSEXYIHXIGRLDVPNXKG 718
TD GL + K + YP+ SE Y+H IGR N G
Sbjct: 461 TDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTG 502
>AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p
protein.
Length = 945
Score = 32.7 bits (71), Expect = 0.67
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FFTP N++QA +L+S L+E Q S L +A
Sbjct: 594 FFTPDNAKQARELISVLEEAGQTPSQALLDLA 625
>AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-PB
protein.
Length = 945
Score = 32.7 bits (71), Expect = 0.67
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -3
Query: 707 FFTPSNSRQAXDLVSXLQEXYQMISPQLQSMA 612
FFTP N++QA +L+S L+E Q S L +A
Sbjct: 594 FFTPDNAKQARELISVLEEAGQTPSQALLDLA 625
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,024,315
Number of Sequences: 53049
Number of extensions: 344356
Number of successful extensions: 473
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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