Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_G16
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537867-1|CAD97869.1| 972|Homo sapiens hypothetical protein pr... 149 1e-35
BC050464-1|AAH50464.1| 963|Homo sapiens esophageal cancer assoc... 149 1e-35
BC058845-1|AAH58845.1| 963|Homo sapiens esophageal cancer assoc... 149 2e-35
BC014900-1|AAH14900.2| 869|Homo sapiens MGC16824 protein protein. 149 2e-35
AK024693-1|BAB14965.1| 824|Homo sapiens protein ( Homo sapiens ... 130 5e-30
AF461052-1|AAL67806.2| 813|Homo sapiens esophageal cancer assoc... 71 8e-12
X04714-1|CAA28420.1| 4560|Homo sapiens apo-B100 precursor protein. 34 0.80
X04506-1|CAA28191.1| 4563|Homo sapiens protein ( Human mRNA for ... 34 0.80
M19828-1|AAB00481.1| 4563|Homo sapiens protein ( Human apolipopr... 34 0.80
M15421-1|AAA51758.1| 3262|Homo sapiens APOB protein. 34 0.80
M14162-1|AAB04636.1| 4563|Homo sapiens APOB protein. 34 0.80
J02610-1|AAA35549.1| 4563|Homo sapiens protein ( Human apolipopr... 34 0.80
AY324608-1|AAP72970.1| 4563|Homo sapiens apolipoprotein B (inclu... 34 0.80
AC010872-1|AAX88848.1| 3929|Homo sapiens unknown protein. 34 0.80
>BX537867-1|CAD97869.1| 972|Homo sapiens hypothetical protein
protein.
Length = 972
Score = 149 bits (362), Expect = 1e-35
Identities = 102/262 (38%), Positives = 143/262 (54%), Gaps = 30/262 (11%)
Frame = +2
Query: 74 YTKGKTMPTFEWKSKNQK--------RIICKALKFEVSHHPLKTNHVL---FKKISNKGF 220
+ GK M F W S+N+ R+ L+F +HPLK V KK++ KG
Sbjct: 5 HVTGK-MAVFPWHSRNRNYKAEFASCRLEAVPLEFG-DYHPLKPITVTESKTKKVNRKGS 62
Query: 221 IDDLSKWSAG---------FEEIDPLLKFEQMALDEDLVHA----------DDEGIGVNY 343
S S+ + DPL F A L A DD + +
Sbjct: 63 TSSTSSSSSSSVVDPLSSVLDGTDPLSMFAATADPAALAAAMDSSRRKRDRDDNSVVGSD 122
Query: 344 AKEWNTRRTIVLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNEKVKNRLEQLDD 523
+ W +R +L RYTT EKL+I + G EK +A + ++EKV+ RLE+LDD
Sbjct: 123 FEPWTNKRGEILARYTTTEKLSI--NLFMGSEKGKAGTATLA----MSEKVRTRLEELDD 176
Query: 524 FDDDSVRKTMGLSQQEFVTKINMLNDEIKKAWESEQRVKAFKIGIQCSKLLSDVNVMHFY 703
F++ S ++ + L+QQ++V +I LN +K AW S+Q+VKA KI IQCSKLLSD +V+ FY
Sbjct: 177 FEEGSQKELLNLTQQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTSVIQFY 236
Query: 704 PSKFILITDILDTFGNLVFDRL 769
PSKF+LITDILDTFG LV++R+
Sbjct: 237 PSKFVLITDILDTFGKLVYERI 258
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 819 PERSAGNGKRXCQNWLYKMASIXEL 893
PE + K C NW +K+ASI EL
Sbjct: 275 PENANDTAKETCLNWFFKIASIREL 299
>BC050464-1|AAH50464.1| 963|Homo sapiens esophageal cancer
associated protein protein.
Length = 963
Score = 149 bits (361), Expect = 1e-35
Identities = 100/256 (39%), Positives = 140/256 (54%), Gaps = 30/256 (11%)
Frame = +2
Query: 92 MPTFEWKSKNQK--------RIICKALKFEVSHHPLKTNHVL---FKKISNKGFIDDLSK 238
M F W S+N+ R+ L+F +HPLK V KK++ KG S
Sbjct: 1 MAVFPWHSRNRNYKAEFASCRLEAVPLEFG-DYHPLKPITVTESKTKKVNRKGSTSSTSS 59
Query: 239 WSAG---------FEEIDPLLKFEQMALDEDLVHA----------DDEGIGVNYAKEWNT 361
S+ + DPL F A L A DD + + + W
Sbjct: 60 SSSSSVVDPLSSVLDGTDPLSMFAATADPAALAAAMDSSRRKRDRDDNSVVGSDFEPWTN 119
Query: 362 RRTIVLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNEKVKNRLEQLDDFDDDSV 541
+R +L RYTT EKL+I + G EK +A + ++EKV+ RLE+LDDF++ S
Sbjct: 120 KRGEILARYTTTEKLSI--NLFMGSEKGKAGTATLA----MSEKVRTRLEELDDFEEGSQ 173
Query: 542 RKTMGLSQQEFVTKINMLNDEIKKAWESEQRVKAFKIGIQCSKLLSDVNVMHFYPSKFIL 721
++ + L+QQ++V +I LN +K AW S+Q+VKA KI IQCSKLLSD +V+ FYPSKF+L
Sbjct: 174 KELLNLTQQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVL 233
Query: 722 ITDILDTFGNLVFDRL 769
ITDILDTFG LV++R+
Sbjct: 234 ITDILDTFGKLVYERI 249
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 819 PERSAGNGKRXCQNWLYKMASIXEL 893
PE + K C NW +K+ASI EL
Sbjct: 266 PENANDTAKETCLNWFFKIASIREL 290
>BC058845-1|AAH58845.1| 963|Homo sapiens esophageal cancer
associated protein protein.
Length = 963
Score = 149 bits (360), Expect = 2e-35
Identities = 74/151 (49%), Positives = 105/151 (69%)
Frame = +2
Query: 317 DDEGIGVNYAKEWNTRRTIVLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNEKV 496
DD + + + W +R +L RYTT EKL+I + G EK +A + ++EKV
Sbjct: 105 DDNSVVGSDFEPWTNKRGEILARYTTTEKLSI--NLFMGSEKGKAGTATLA----MSEKV 158
Query: 497 KNRLEQLDDFDDDSVRKTMGLSQQEFVTKINMLNDEIKKAWESEQRVKAFKIGIQCSKLL 676
+ RLE+LDDF++ S ++ + L+QQ++V +I LN +K AW S+Q+VKA KI IQCSKLL
Sbjct: 159 RTRLEELDDFEEGSQKELLNLTQQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSKLL 218
Query: 677 SDVNVMHFYPSKFILITDILDTFGNLVFDRL 769
SD +V+ FYPSKF+LITDILDTFG LV++R+
Sbjct: 219 SDTSVIQFYPSKFVLITDILDTFGKLVYERI 249
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 819 PERSAGNGKRXCQNWLYKMASIXEL 893
PE + K C NW +K+ASI EL
Sbjct: 266 PENANDTAKETCLNWFFKIASIREL 290
>BC014900-1|AAH14900.2| 869|Homo sapiens MGC16824 protein protein.
Length = 869
Score = 149 bits (360), Expect = 2e-35
Identities = 74/151 (49%), Positives = 105/151 (69%)
Frame = +2
Query: 317 DDEGIGVNYAKEWNTRRTIVLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNEKV 496
DD + + + W +R +L RYTT EKL+I + G EK +A + ++EKV
Sbjct: 11 DDNSVVGSDFEPWTNKRGEILARYTTTEKLSI--NLFMGSEKGKAGTATLA----MSEKV 64
Query: 497 KNRLEQLDDFDDDSVRKTMGLSQQEFVTKINMLNDEIKKAWESEQRVKAFKIGIQCSKLL 676
+ RLE+LDDF++ S ++ + L+QQ++V +I LN +K AW S+Q+VKA KI IQCSKLL
Sbjct: 65 RTRLEELDDFEEGSQKELLNLTQQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSKLL 124
Query: 677 SDVNVMHFYPSKFILITDILDTFGNLVFDRL 769
SD +V+ FYPSKF+LITDILDTFG LV++R+
Sbjct: 125 SDTSVIQFYPSKFVLITDILDTFGKLVYERI 155
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 819 PERSAGNGKRXCQNWLYKMASIXEL 893
PE + K C NW +K+ASI EL
Sbjct: 172 PENANDTAKETCLNWFFKIASIREL 196
>AK024693-1|BAB14965.1| 824|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21040 fis, clone CAE10642. ).
Length = 824
Score = 130 bits (315), Expect = 5e-30
Identities = 57/96 (59%), Positives = 79/96 (82%)
Frame = +2
Query: 482 LNEKVKNRLEQLDDFDDDSVRKTMGLSQQEFVTKINMLNDEIKKAWESEQRVKAFKIGIQ 661
++EKV+ RLE+LDDF++ S ++ + L+QQ++V +I LN +K AW S+Q+VKA KI IQ
Sbjct: 15 MSEKVRTRLEELDDFEEGSQKELLNLTQQDYVNRIEELNQSLKDAWASDQKVKALKIVIQ 74
Query: 662 CSKLLSDVNVMHFYPSKFILITDILDTFGNLVFDRL 769
CSKLLSD +V+ FYPSKF+LITDILDTFG LV++R+
Sbjct: 75 CSKLLSDTSVIQFYPSKFVLITDILDTFGKLVYERI 110
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 819 PERSAGNGKRXCQNWLYKMASIXEL 893
PE + K C NW +K+ASI EL
Sbjct: 127 PENANDTAKETCLNWFFKIASIREL 151
>AF461052-1|AAL67806.2| 813|Homo sapiens esophageal cancer
associated protein protein.
Length = 813
Score = 70.5 bits (165), Expect = 8e-12
Identities = 30/60 (50%), Positives = 46/60 (76%)
Frame = +2
Query: 482 LNEKVKNRLEQLDDFDDDSVRKTMGLSQQEFVTKINMLNDEIKKAWESEQRVKAFKIGIQ 661
++EKV+ RLE+LDDF++ S ++ + L+QQ++V +I LN +K AW S+Q+VKA KI IQ
Sbjct: 32 MSEKVRTRLEELDDFEEGSQKELLNLTQQDYVNRIEELNQSLKDAWASDQKVKALKIVIQ 91
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 819 PERSAGNGKRXCQNWLYKMASIXEL 893
PE + K C NW +K+ASI EL
Sbjct: 116 PENANDTAKETCLNWFFKIASIREL 140
>X04714-1|CAA28420.1| 4560|Homo sapiens apo-B100 precursor protein.
Length = 4560
Score = 33.9 bits (74), Expect = 0.80
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 374 VLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNE--KVKNRLEQLDDFDDDSVRK 547
++ RY +++ ++ L I+++SN+ + K+K+ E+L F DD+V+K
Sbjct: 2341 LIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKK 2400
Query: 548 TMGLSQQEFVTKINMLNDEIKKAWES 625
LS + F+ +N D + K +S
Sbjct: 2401 LNELSFKTFIEDVNKFLDMLIKKLKS 2426
>X04506-1|CAA28191.1| 4563|Homo sapiens protein ( Human mRNA for
apolipoprotein B-100. ).
Length = 4563
Score = 33.9 bits (74), Expect = 0.80
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 374 VLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNE--KVKNRLEQLDDFDDDSVRK 547
++ RY +++ ++ L I+++SN+ + K+K+ E+L F DD+V+K
Sbjct: 2344 LIERYEVDQQIQVLMDKLVELTHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKK 2403
Query: 548 TMGLSQQEFVTKINMLNDEIKKAWES 625
LS + F+ +N D + K +S
Sbjct: 2404 LNELSFKTFIEDVNKFLDMLIKKLKS 2429
>M19828-1|AAB00481.1| 4563|Homo sapiens protein ( Human apolipoprotein
B-100 (apoB) gene, exons 22 through 29. ).
Length = 4563
Score = 33.9 bits (74), Expect = 0.80
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 374 VLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNE--KVKNRLEQLDDFDDDSVRK 547
++ RY +++ ++ L I+++SN+ + K+K+ E+L F DD+V+K
Sbjct: 2344 LIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKK 2403
Query: 548 TMGLSQQEFVTKINMLNDEIKKAWES 625
LS + F+ +N D + K +S
Sbjct: 2404 LNELSFKTFIEDVNKFLDMLIKKLKS 2429
>M15421-1|AAA51758.1| 3262|Homo sapiens APOB protein.
Length = 3262
Score = 33.9 bits (74), Expect = 0.80
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 374 VLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNE--KVKNRLEQLDDFDDDSVRK 547
++ RY +++ ++ L I+++SN+ + K+K+ E+L F DD+V+K
Sbjct: 1063 LIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKK 1122
Query: 548 TMGLSQQEFVTKINMLNDEIKKAWES 625
LS + F+ +N D + K +S
Sbjct: 1123 LNELSFKTFIEDVNKFLDMLIKKLKS 1148
>M14162-1|AAB04636.1| 4563|Homo sapiens APOB protein.
Length = 4563
Score = 33.9 bits (74), Expect = 0.80
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 374 VLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNE--KVKNRLEQLDDFDDDSVRK 547
++ RY +++ ++ L I+++SN+ + K+K+ E+L F DD+V+K
Sbjct: 2344 LIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKK 2403
Query: 548 TMGLSQQEFVTKINMLNDEIKKAWES 625
LS + F+ +N D + K +S
Sbjct: 2404 LNELSFKTFIEDVNKFLDMLIKKLKS 2429
>J02610-1|AAA35549.1| 4563|Homo sapiens protein ( Human apolipoprotein
B-100 mRNA, complete cds. ).
Length = 4563
Score = 33.9 bits (74), Expect = 0.80
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 374 VLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNE--KVKNRLEQLDDFDDDSVRK 547
++ RY +++ ++ L I+++SN+ + K+K+ E+L F DD+V+K
Sbjct: 2344 LIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKK 2403
Query: 548 TMGLSQQEFVTKINMLNDEIKKAWES 625
LS + F+ +N D + K +S
Sbjct: 2404 LNELSFKTFIEDVNKFLDMLIKKLKS 2429
>AY324608-1|AAP72970.1| 4563|Homo sapiens apolipoprotein B (including
Ag(x) antigen) protein.
Length = 4563
Score = 33.9 bits (74), Expect = 0.80
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 374 VLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNE--KVKNRLEQLDDFDDDSVRK 547
++ RY +++ ++ L I+++SN+ + K+K+ E+L F DD+V+K
Sbjct: 2344 LIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKK 2403
Query: 548 TMGLSQQEFVTKINMLNDEIKKAWES 625
LS + F+ +N D + K +S
Sbjct: 2404 LNELSFKTFIEDVNKFLDMLIKKLKS 2429
>AC010872-1|AAX88848.1| 3929|Homo sapiens unknown protein.
Length = 3929
Score = 33.9 bits (74), Expect = 0.80
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 374 VLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNE--KVKNRLEQLDDFDDDSVRK 547
++ RY +++ ++ L I+++SN+ + K+K+ E+L F DD+V+K
Sbjct: 2344 LIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDAVKK 2403
Query: 548 TMGLSQQEFVTKINMLNDEIKKAWES 625
LS + F+ +N D + K +S
Sbjct: 2404 LNELSFKTFIEDVNKFLDMLIKKLKS 2429
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,135,232
Number of Sequences: 237096
Number of extensions: 2522371
Number of successful extensions: 5038
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5026
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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