Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_G16
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical p... 57 2e-08
AF025458-3|AAB70976.1| 612|Caenorhabditis elegans Hypothetical ... 37 0.022
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 34 0.16
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 34 0.16
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 32 0.64
Z78413-8|CAB01665.2| 541|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF067944-1|AAC17672.1| 237|Caenorhabditis elegans Hypothetical ... 29 3.4
Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical pr... 29 6.0
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 29 6.0
Z83233-11|CAB05757.2| 292|Caenorhabditis elegans Hypothetical p... 28 7.9
Z81581-15|CAI46619.1| 729|Caenorhabditis elegans Hypothetical p... 28 7.9
Z81143-10|CAB03514.2| 729|Caenorhabditis elegans Hypothetical p... 28 7.9
Z70686-9|CAA94614.3| 915|Caenorhabditis elegans Hypothetical pr... 28 7.9
U88170-10|AAB42242.2| 340|Caenorhabditis elegans Serpentine rec... 28 7.9
DQ372920-1|ABD16184.1| 729|Caenorhabditis elegans Krev interact... 28 7.9
AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical ... 28 7.9
AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical ... 28 7.9
>U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical
protein F26G1.1 protein.
Length = 1021
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Frame = +2
Query: 494 VKNRLEQLDDFDD-DSVRKTMGLSQQEFVTKINMLNDEIKKAWESEQRVKAFKIGIQCSK 670
++ RL+ L D + +V+K +SQ+ + + N++ AW E RV++FKI I+ +
Sbjct: 229 LRARLKSLSDEKNLKNVKKAGDVSQRFLILRENLIT-----AWGREDRVESFKIVIESAN 283
Query: 671 LLSDVNVM-HFYPSKFILITDILDTFGNLVFDRLCEKS 781
LL + YP ++L D++DTFG L++DRL KS
Sbjct: 284 LLQSIPPQSEEYPYYWLLAIDVVDTFGKLLYDRLLAKS 321
>AF025458-3|AAB70976.1| 612|Caenorhabditis elegans Hypothetical
protein C01B12.3 protein.
Length = 612
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 380 NRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNEKVKNRLEQLDDFDDDSVRK 547
+ Y +GE L +SF GG K+S +R S + ++ + R DF++ +K
Sbjct: 413 SNYASGESLAFSNSFANGGRKLSEMFRRMRAGSRIGDRYRKRNSSAQDFENGMAKK 468
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 33.9 bits (74), Expect = 0.16
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 461 LIRQVSNLNEKVKNRLEQLD-DFDDDSVRKTMGLSQQEFVTKINMLNDEIKKAWESEQRV 637
LI S+L ++ N L +L D +DD R + + TK+ +++D++ KA +
Sbjct: 383 LISNHSHLRGQIINSLLRLSVDLNDDIRRDVVTGVTEVAKTKLEVISDKMLKACAERMKD 442
Query: 638 KAFKIGIQCSKLLSDV--NVMHFYPSKF 715
K K+ IQ K L D+ +VM P F
Sbjct: 443 KKPKVRIQAIKRLMDLYNHVMTSSPQPF 470
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 33.9 bits (74), Expect = 0.16
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 461 LIRQVSNLNEKVKNRLEQLD-DFDDDSVRKTMGLSQQEFVTKINMLNDEIKKAWESEQRV 637
LI S+L ++ N L +L D +DD R + + TK+ +++D++ KA +
Sbjct: 383 LISNHSHLRGQIINSLLRLSVDLNDDIRRDVVTGVTEVAKTKLEVISDKMLKACAERMKD 442
Query: 638 KAFKIGIQCSKLLSDV--NVMHFYPSKF 715
K K+ IQ K L D+ +VM P F
Sbjct: 443 KKPKVRIQAIKRLMDLYNHVMTSSPQPF 470
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 31.9 bits (69), Expect = 0.64
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 341 YAKEWNTRRTIVLNRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNEKV 496
Y+ WN+ RT N Y TG++L +++ G + +F I +V N +
Sbjct: 516 YSVIWNSLRTYSNNGYATGKQLDVMTGITLGSTALPSFVGSIARVGVWNRVI 567
>Z78413-8|CAB01665.2| 541|Caenorhabditis elegans Hypothetical
protein T01C3.8 protein.
Length = 541
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 380 NRYTTGEKLTIVSSFLPGGEKISTFSALIRQVSNLNEKVKNRLEQLDDF 526
N + T T +S+ + F +++ +K+KN +EQLDDF
Sbjct: 167 NTHITNLDTTELSNEFMTSNRSRVFIGSFKKIKEYIDKLKNEMEQLDDF 215
>AF067944-1|AAC17672.1| 237|Caenorhabditis elegans Hypothetical
protein K10C9.4 protein.
Length = 237
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -1
Query: 652 YFKSFHSLLRLPCLLNFIIQHIYFGNKFLLAQTHCF 545
+F++F L+ +P L+NFII + +LLA T+CF
Sbjct: 35 WFRTFQFLIYIPPLINFIII-----SNWLLAVTYCF 65
>Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical
protein K11E4.4 protein.
Length = 825
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +2
Query: 410 IVSSFLPGGEKISTFSALIRQVSNLNEKVKNRLE-QLDDFDDDSVRKTMGLSQQEFVTKI 586
IV + P + SA+ R+ +L E ++ + E QLD V K + S++ + +
Sbjct: 420 IVPANHPDRGDLQRGSAVFRETKDLCETLRKQKEAQLDFLFVSKVDKVVSASERGSILYV 479
Query: 587 NMLNDEIKKAWESEQRVKAFKIGIQCSKLLSDV 685
+ N E KKA ++ V F I ++ D+
Sbjct: 480 GVANVEYKKADAVDRFVALFTKYIMFFEVTKDM 512
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 28.7 bits (61), Expect = 6.0
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 557 LSQ-QEFVTKINMLNDEIKKAWESEQRVKAFKIGIQCSKLLSDVNVMHFYPSKFILITDI 733
LSQ E+V +LN + ++ S++R I I S+LL V M +PSK+ T +
Sbjct: 503 LSQIAEYVIDSFILNATLVRSHASDERQL---IVIDFSRLLEAVRSME-WPSKYGDTTRL 558
Query: 734 LDTFGNLVFDRLCEKSLGKSL 796
LD FG+ V L + + KS+
Sbjct: 559 LDLFGSDVDVMLRVEGVKKSI 579
>Z83233-11|CAB05757.2| 292|Caenorhabditis elegans Hypothetical
protein K06B4.9 protein.
Length = 292
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -2
Query: 708 LG*KCMTLTSDSSLEHWIPILKAFTLCSDSHAF--LISSFNIFILVTNSCWLKPIVF 544
+G CMT+ S+L H + L F + H + L S+ N +++ N W+ I+F
Sbjct: 79 VGNTCMTIYEISNLSHLLIALNRFCVLFFQHRYEQLFSNPNT-VIMRNYLWITCIIF 134
>Z81581-15|CAI46619.1| 729|Caenorhabditis elegans Hypothetical
protein ZK265.1a protein.
Length = 729
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 230 LSKWSAGFEEIDPLLKFEQMALDEDLVHADDEGIGVNYAKEWNTRRTIVLNRYTTGEK 403
L + A F ++D K + M ++ LV +D G+ + + K W T + + +T K
Sbjct: 637 LVTYGASFFDVDVFTK-KSMGTEQGLVGVNDHGLHIIFKKTW-TVKNFRFDEFTASNK 692
>Z81143-10|CAB03514.2| 729|Caenorhabditis elegans Hypothetical
protein ZK265.1a protein.
Length = 729
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 230 LSKWSAGFEEIDPLLKFEQMALDEDLVHADDEGIGVNYAKEWNTRRTIVLNRYTTGEK 403
L + A F ++D K + M ++ LV +D G+ + + K W T + + +T K
Sbjct: 637 LVTYGASFFDVDVFTK-KSMGTEQGLVGVNDHGLHIIFKKTW-TVKNFRFDEFTASNK 692
>Z70686-9|CAA94614.3| 915|Caenorhabditis elegans Hypothetical
protein R10H10.7 protein.
Length = 915
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 374 VLNRYTTGEKLTIVSSFLPGGEKISTFSAL 463
+L + TT EK++++ F G E ISTF L
Sbjct: 71 ILPKMTTPEKISLIRMFNQGLEMISTFDEL 100
>U88170-10|AAB42242.2| 340|Caenorhabditis elegans Serpentine
receptor, class h protein50 protein.
Length = 340
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 666 EHWIPILKAFTLCSDSHAFLISSFNIFILVTNS 568
+H +P F D H LI FN F TNS
Sbjct: 131 KHLVPSTDVFYQIRDQHRILIGIFNFFAGATNS 163
>DQ372920-1|ABD16184.1| 729|Caenorhabditis elegans Krev interaction
trapped/cerebralcavernous malformation 1 isoform a
protein.
Length = 729
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 230 LSKWSAGFEEIDPLLKFEQMALDEDLVHADDEGIGVNYAKEWNTRRTIVLNRYTTGEK 403
L + A F ++D K + M ++ LV +D G+ + + K W T + + +T K
Sbjct: 637 LVTYGASFFDVDVFTK-KSMGTEQGLVGVNDHGLHIIFKKTW-TVKNFRFDEFTASNK 692
>AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical
protein ZK484.4a protein.
Length = 919
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 488 EKVKNRLEQLD-DFDDDSVRKTMGLSQQEFVTKINMLNDEIKKAWESEQRVKAFKIGIQC 664
+K ++E+++ + ++D S+++ VT +++E+K+ ++ R A G +C
Sbjct: 444 QKKTTKVEEIEMNEEEDGEIGAESTSKRKTVTIKEEIDEEVKQTPMAKLRASAKLNGKRC 503
Query: 665 SKLLSDV 685
SK LSD+
Sbjct: 504 SKRLSDL 510
>AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical
protein ZK484.4b protein.
Length = 873
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 488 EKVKNRLEQLD-DFDDDSVRKTMGLSQQEFVTKINMLNDEIKKAWESEQRVKAFKIGIQC 664
+K ++E+++ + ++D S+++ VT +++E+K+ ++ R A G +C
Sbjct: 444 QKKTTKVEEIEMNEEEDGEIGAESTSKRKTVTIKEEIDEEVKQTPMAKLRASAKLNGKRC 503
Query: 665 SKLLSDV 685
SK LSD+
Sbjct: 504 SKRLSDL 510
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,947,855
Number of Sequences: 27780
Number of extensions: 429227
Number of successful extensions: 1265
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -