Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_G14
(835 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93388-3|CAB07655.1| 230|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z81476-3|CAB03922.3| 592|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 31 0.77
Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical pr... 30 1.8
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 29 3.1
U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (... 29 3.1
AL032623-14|CAA21518.1| 593|Caenorhabditis elegans Hypothetical... 29 3.1
AF016674-6|AAB66129.1| 530|Caenorhabditis elegans Hypothetical ... 29 5.4
Z93380-5|CAB07601.1| 240|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81533-6|CAB04339.1| 347|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z75526-2|CAA99768.2| 341|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z93388-3|CAB07655.1| 230|Caenorhabditis elegans Hypothetical
protein T10C6.5 protein.
Length = 230
Score = 109 bits (263), Expect = 2e-24
Identities = 68/174 (39%), Positives = 94/174 (54%), Gaps = 13/174 (7%)
Frame = +1
Query: 283 SGQGTSEELRSRDFRKELDDREKDV----KTTTTKRTSEPQAKRTKVDQVPA---ASLDA 441
+GQ T +LR +D R+EL+D+E++ + + +S +KR ++DQ+ A AS+DA
Sbjct: 46 TGQETEADLRKKDLRRELEDKERNAIREKRARDSASSSSSHSKRQRMDQIAAESAASVDA 105
Query: 442 DDPLE--GXXXXXXXXXXXXAALLAELNRXXXXXXXXXXXXXXXXXXXXXXXXMENILSG 615
D+ ++ AAL+AEL + MENIL+G
Sbjct: 106 DEAVDELNSSDDDDSDEDDTAALMAELEKIKKERAEEKAARDEEIKEKEEKQRMENILAG 165
Query: 616 NPLLNYSAAGQKN---DMKVKRRWDDDVVFKNCARS-EPEKKPNTFINDSLRSE 765
NPLLN + AG D VKRRWDDDVVFKNCA+ E KK TFIND++RSE
Sbjct: 166 NPLLNDTPAGSSTSGGDFTVKRRWDDDVVFKNCAKGVEERKKEVTFINDAIRSE 219
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +3
Query: 147 MTTAARPTFDPARGGQGRGEKDLSAISRQYSSRDLPGHTKLKYR 278
MTTA RPTF PARGG RGE DLS +S QYSS+D+P HTK+KYR
Sbjct: 1 MTTAHRPTFHPARGGTARGEGDLSKLSNQYSSKDMPSHTKMKYR 44
>Z81476-3|CAB03922.3| 592|Caenorhabditis elegans Hypothetical
protein C25F9.4 protein.
Length = 592
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 298 SEELRSRDFRKELDDREKDVKTTTTKRTSEP 390
S E +SR+ + LDDR+KD K+ +R +EP
Sbjct: 213 SAEPKSRNLKTPLDDRQKDFKSNLAQRENEP 243
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/51 (25%), Positives = 29/51 (56%)
Frame = +1
Query: 628 NYSAAGQKNDMKVKRRWDDDVVFKNCARSEPEKKPNTFINDSLRSESIRNY 780
N + +K +MK+++ + +++ K +S EKKPNT + +L++ +
Sbjct: 144 NMEQSSEKQEMKLEKDKNRELLSKILGKSVEEKKPNTIESSTLKARPFTRF 194
>Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical
protein M04C3.2 protein.
Length = 606
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 298 SEELRSRDFRKELDDREKDVKTTTTKRTSEP 390
S E +SR+ + LD R+KD K+ +R EP
Sbjct: 214 SAEPKSRNLKTPLDGRQKDFKSNLAQREKEP 244
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform b protein.
Length = 1069
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/67 (20%), Positives = 31/67 (46%)
Frame = +1
Query: 256 VIRNLNTGXSGQGTSEELRSRDFRKELDDREKDVKTTTTKRTSEPQAKRTKVDQVPAASL 435
V + ++TG S E + R ++ ++ + TK+ +P K T+ + P +++
Sbjct: 581 VTKEIDTGASAAANVPETKHRVSGTVVEGKDSKSQLLATKKVKKPTIKNTEHRRAPESTV 640
Query: 436 DADDPLE 456
P+E
Sbjct: 641 PIGPPVE 647
>U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform a protein.
Length = 1065
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/67 (20%), Positives = 31/67 (46%)
Frame = +1
Query: 256 VIRNLNTGXSGQGTSEELRSRDFRKELDDREKDVKTTTTKRTSEPQAKRTKVDQVPAASL 435
V + ++TG S E + R ++ ++ + TK+ +P K T+ + P +++
Sbjct: 577 VTKEIDTGASAAANVPETKHRVSGTVVEGKDSKSQLLATKKVKKPTIKNTEHRRAPESTV 636
Query: 436 DADDPLE 456
P+E
Sbjct: 637 PIGPPVE 643
>AL032623-14|CAA21518.1| 593|Caenorhabditis elegans Hypothetical
protein Y43F8B.14 protein.
Length = 593
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 298 SEELRSRDFRKELDDREKDVKTTTTKRTSEP 390
S+E +SR + L D +KD K + +R EP
Sbjct: 210 SDETKSRKLKTSLKDHQKDFKKSLAQREKEP 240
>AF016674-6|AAB66129.1| 530|Caenorhabditis elegans Hypothetical
protein C03H5.6 protein.
Length = 530
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 305 NYALVIFVRSWMIEKKMLKLRLQNVQVNHKQKELRLIKFLQQVLMLMILLKAIPLTLMIQ 484
N+ + F ++W +E +L L NVQ H + L I + + + +PL Q
Sbjct: 5 NFLPIAFCKAWCVECPDRELILANVQYEHVLEMLECIHPTYKAVDDQSVHILLPLAYDYQ 64
Query: 485 MMILLH 502
M LLH
Sbjct: 65 MEGLLH 70
>Z93380-5|CAB07601.1| 240|Caenorhabditis elegans Hypothetical
protein F28C12.6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/63 (25%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Frame = +2
Query: 290 KGHLRNY-ALVIFVRSWMIEKKMLK--LRLQNVQVNHKQKELRLI--KFLQQVLMLMILL 454
K L +Y +L+ F+R + +++++ + ++ VQ+NH+++ R+I K + +++ L+I++
Sbjct: 146 KKRLGDYDSLLQFIRRKLHNRQIIQHSVEMKQVQINHRRQTQRIIKPKHIFRIIFLIIII 205
Query: 455 KAI 463
I
Sbjct: 206 VII 208
>Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical
protein F53A2.1 protein.
Length = 859
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 292 GTSEELRSRDFRKELDDREKDVKTTTTKRTSEPQAKRTK 408
GTS++L S F+KE+D TTTT +TS R +
Sbjct: 296 GTSQKLLS--FQKEIDSLNNVTSTTTTLQTSTYTTSRPR 332
>Z81533-6|CAB04339.1| 347|Caenorhabditis elegans Hypothetical
protein F36G9.9 protein.
Length = 347
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +2
Query: 314 LVIFVRSWMIEKKMLKLRLQNVQVNHKQKELRLIKFLQQVLMLMILLKAIPLTLMIQMMI 493
+ + V WM + + ++ + + K+ L+LIK L Q +++ IL IP+ +++ ++
Sbjct: 214 VTVIVLIWMSSRSLKSIQ---ISLTTKRMHLQLIKSLCQQIIVPILAFYIPIIVVVVPLM 270
Query: 494 L 496
L
Sbjct: 271 L 271
>Z75526-2|CAA99768.2| 341|Caenorhabditis elegans Hypothetical
protein C06H2.2 protein.
Length = 341
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 649 KNDMKVKRRWDDDVVFKNCARSEPEKK 729
+ND+K ++ WDD++V + E E +
Sbjct: 132 QNDLKYRKEWDDNIVTIEVVKEENENE 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,496,749
Number of Sequences: 27780
Number of extensions: 236760
Number of successful extensions: 909
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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