Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_G11
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical pr... 76 4e-14
Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical pr... 76 4e-14
Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical pr... 76 4e-14
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 70 2e-12
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 70 2e-12
Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical pr... 66 4e-11
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 52 6e-07
AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical... 37 0.022
AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical... 31 0.83
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 29 5.9
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 29 5.9
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 29 5.9
U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 rela... 28 7.8
AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell fac... 28 7.8
>Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical
protein R11A5.4b protein.
Length = 582
Score = 75.8 bits (178), Expect = 4e-14
Identities = 36/111 (32%), Positives = 60/111 (54%)
Frame = +2
Query: 386 LTPKVRAFVERSAALCQPKHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDNCWLARTDP 565
L KV+ F+ A L +P+ + +CDGS+ EA +L Y+N ++ RTDP
Sbjct: 53 LPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDP 112
Query: 566 ADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPGLREGSVRQIPG 718
DVARVES+T++ + + D V + G + +G++++P L + PG
Sbjct: 113 KDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPG 163
Score = 63.7 bits (148), Expect = 2e-10
Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 654 PPWGTTSPPRDYEKAVSDRFLXCMRGRTMYVIXFSMGPVGSPLSKIGVE-SRIRLSXFSM 830
P G P D + RF CM GR MYVI FSMGPVG PLSKIG++ + SM
Sbjct: 142 PIMGHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSM 201
Query: 831 RVMTR 845
R+MTR
Sbjct: 202 RIMTR 206
>Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical
protein R11A5.4d protein.
Length = 618
Score = 75.8 bits (178), Expect = 4e-14
Identities = 36/111 (32%), Positives = 60/111 (54%)
Frame = +2
Query: 386 LTPKVRAFVERSAALCQPKHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDNCWLARTDP 565
L KV+ F+ A L +P+ + +CDGS+ EA +L Y+N ++ RTDP
Sbjct: 17 LPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDP 76
Query: 566 ADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPGLREGSVRQIPG 718
DVARVES+T++ + + D V + G + +G++++P L + PG
Sbjct: 77 KDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPG 127
Score = 63.7 bits (148), Expect = 2e-10
Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 654 PPWGTTSPPRDYEKAVSDRFLXCMRGRTMYVIXFSMGPVGSPLSKIGVE-SRIRLSXFSM 830
P G P D + RF CM GR MYVI FSMGPVG PLSKIG++ + SM
Sbjct: 106 PIMGHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSM 165
Query: 831 RVMTR 845
R+MTR
Sbjct: 166 RIMTR 170
>Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical
protein R11A5.4a protein.
Length = 654
Score = 75.8 bits (178), Expect = 4e-14
Identities = 36/111 (32%), Positives = 60/111 (54%)
Frame = +2
Query: 386 LTPKVRAFVERSAALCQPKHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDNCWLARTDP 565
L KV+ F+ A L +P+ + +CDGS+ EA +L Y+N ++ RTDP
Sbjct: 53 LPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDP 112
Query: 566 ADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPGLREGSVRQIPG 718
DVARVES+T++ + + D V + G + +G++++P L + PG
Sbjct: 113 KDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPG 163
Score = 63.7 bits (148), Expect = 2e-10
Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 654 PPWGTTSPPRDYEKAVSDRFLXCMRGRTMYVIXFSMGPVGSPLSKIGVE-SRIRLSXFSM 830
P G P D + RF CM GR MYVI FSMGPVG PLSKIG++ + SM
Sbjct: 142 PIMGHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSM 201
Query: 831 RVMTR 845
R+MTR
Sbjct: 202 RIMTR 206
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 70.1 bits (164), Expect = 2e-12
Identities = 45/145 (31%), Positives = 67/145 (46%)
Frame = +2
Query: 380 ATLTPKVRAFVERSAALCQPKHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDNCWLART 559
A+L+PKV+ FV A L P +++CDGS+ E L Y+N +L RT
Sbjct: 38 ASLSPKVQRFVAEKAELMNPAGIYICDGSQKEYDDIVDKLVERGVLTPLKAYENNYLCRT 97
Query: 560 DPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPGLREGSVRQIPGLHERSHD 739
DP DVARVES+T++ + + D V G + +G ++S + PG
Sbjct: 98 DPRDVARVESKTWMVTKDKYDSVCHTPDGVRPIMGQWMSEEQFGVELDSRFPGCMAGRPM 157
Query: 740 VRDTVLDGPCGISSLEDWCGITDSP 814
GP G ++ +TDSP
Sbjct: 158 YVVPYSMGPIGGPLSKNGIELTDSP 182
Score = 52.0 bits (119), Expect = 6e-07
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 654 PPWGTTSPPRDYEKAVSDRFLXCMRGRTMYVIXFSMGPVGSPLSKIGVE-SRIRLSXFSM 830
P G + + RF CM GR MYV+ +SMGP+G PLSK G+E + M
Sbjct: 129 PIMGQWMSEEQFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCM 188
Query: 831 RVMTR 845
R MTR
Sbjct: 189 RTMTR 193
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 70.1 bits (164), Expect = 2e-12
Identities = 45/145 (31%), Positives = 67/145 (46%)
Frame = +2
Query: 380 ATLTPKVRAFVERSAALCQPKHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDNCWLART 559
A+L+PKV+ FV A L P +++CDGS+ E L Y+N +L RT
Sbjct: 38 ASLSPKVQRFVAEKAELMNPAGIYICDGSQKEYDDIVDKLVERGVLTPLKAYENNYLCRT 97
Query: 560 DPADVARVESRTFICSDRESDVVPSARAGQKSALGNYISPPGLREGSVRQIPGLHERSHD 739
DP DVARVES+T++ + + D V G + +G ++S + PG
Sbjct: 98 DPRDVARVESKTWMVTKDKYDSVCHTPDGVRPIMGQWMSEEQFGVELDSRFPGCMAGRPM 157
Query: 740 VRDTVLDGPCGISSLEDWCGITDSP 814
GP G ++ +TDSP
Sbjct: 158 YVVPYSMGPIGGPLSKNGIELTDSP 182
Score = 52.0 bits (119), Expect = 6e-07
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 654 PPWGTTSPPRDYEKAVSDRFLXCMRGRTMYVIXFSMGPVGSPLSKIGVE-SRIRLSXFSM 830
P G + + RF CM GR MYV+ +SMGP+G PLSK G+E + M
Sbjct: 129 PIMGQWMSEEQFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCM 188
Query: 831 RVMTR 845
R MTR
Sbjct: 189 RTMTR 193
>Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical
protein R11A5.4c protein.
Length = 587
Score = 65.7 bits (153), Expect = 4e-11
Identities = 30/95 (31%), Positives = 52/95 (54%)
Frame = +2
Query: 434 QPKHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDNCWLARTDPADVARVESRTFICSDR 613
+P+ + +CDGS+ EA +L Y+N ++ RTDP DVARVES+T++ +
Sbjct: 2 RPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDPKDVARVESKTWMVTKN 61
Query: 614 ESDVVPSARAGQKSALGNYISPPGLREGSVRQIPG 718
+ D V + G + +G++++P L + PG
Sbjct: 62 KYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPG 96
Score = 63.7 bits (148), Expect = 2e-10
Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 654 PPWGTTSPPRDYEKAVSDRFLXCMRGRTMYVIXFSMGPVGSPLSKIGVE-SRIRLSXFSM 830
P G P D + RF CM GR MYVI FSMGPVG PLSKIG++ + SM
Sbjct: 75 PIMGHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQLTDSNYVVLSM 134
Query: 831 RVMTR 845
R+MTR
Sbjct: 135 RIMTR 139
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 52.0 bits (119), Expect = 6e-07
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 654 PPWGTTSPPRDYEKAVSDRFLXCMRGRTMYVIXFSMGPVGSPLSKIGVE-SRIRLSXFSM 830
P G + + RF CM GR MYV+ +SMGP+G PLSK G+E + M
Sbjct: 19 PIMGQWMSEEQFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCM 78
Query: 831 RVMTR 845
R MTR
Sbjct: 79 RTMTR 83
>AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical
protein H04M03.1 protein.
Length = 624
Score = 36.7 bits (81), Expect = 0.022
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 723 MRGRTMYVIXFSMGPVGSPLSKIGVE 800
M GRTMYV+ FSMG +GS + +GV+
Sbjct: 177 MSGRTMYVVPFSMGTIGSRRAVVGVQ 202
>AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical
protein F07B7.14 protein.
Length = 401
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = +3
Query: 549 WPGQTRQTLP--GLNPARSYAPIGRATWSPRLAPARSPPWGTTSPPRDY--EKAVSDRFL 716
WP R+ P P + +TW A R P ++S P++ ++ +S R
Sbjct: 48 WPASCRRPEPRSSSQPKENLPEENISTWP---ASCRRPEPRSSSQPKENPPKEKISTRLA 104
Query: 717 XCMRGRTMYVIXFSMGPVG 773
C R RT + S+GP G
Sbjct: 105 SCRRPRTSSSLPLSLGPSG 123
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 715 RNLSDTAFS*SRGGDVVPQGGLLAGASRGDHVALPIGAYERA-GFNPG 575
+ L T + S+GGD VP G + GD A+P + +A FN G
Sbjct: 87 KTLGVTRYLQSKGGDQVPPTSTTTGGAGGDGNAVPTTSQAQAQTFNSG 134
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 715 RNLSDTAFS*SRGGDVVPQGGLLAGASRGDHVALPIGAYERA-GFNPG 575
+ L T + S+GGD VP G + GD A+P + +A FN G
Sbjct: 127 KTLGVTRYLQSKGGDQVPPTSTTTGGAGGDGNAVPTTSQAQAQTFNSG 174
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 715 RNLSDTAFS*SRGGDVVPQGGLLAGASRGDHVALPIGAYERA-GFNPG 575
+ L T + S+GGD VP G + GD A+P + +A FN G
Sbjct: 188 KTLGVTRYLQSKGGDQVPPTSTTTGGAGGDGNAVPTTSQAQAQTFNSG 235
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 715 RNLSDTAFS*SRGGDVVPQGGLLAGASRGDHVALPIGAYERA-GFNPG 575
+ L T + S+GGD VP G + GD A+P + +A FN G
Sbjct: 87 KTLGVTRYLQSKGGDQVPPTSTTTGGAGGDGNAVPTTSQAQAQTFNSG 134
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 715 RNLSDTAFS*SRGGDVVPQGGLLAGASRGDHVALPIGAYERA-GFNPG 575
+ L T + S+GGD VP G + GD A+P + +A FN G
Sbjct: 127 KTLGVTRYLQSKGGDQVPPTSTTTGGAGGDGNAVPTTSQAQAQTFNSG 174
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 715 RNLSDTAFS*SRGGDVVPQGGLLAGASRGDHVALPIGAYERA-GFNPG 575
+ L T + S+GGD VP G + GD A+P + +A FN G
Sbjct: 188 KTLGVTRYLQSKGGDQVPPTSTTTGGAGGDGNAVPTTSQAQAQTFNSG 235
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 715 RNLSDTAFS*SRGGDVVPQGGLLAGASRGDHVALPIGAYERA-GFNPG 575
+ L T + S+GGD VP G + GD A+P + +A FN G
Sbjct: 127 KTLGVTRYLQSKGGDQVPPTSTTTGGAGGDGNAVPTTSQAQAQTFNSG 174
>U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 related
protein 1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +3
Query: 531 NTITVGWP---GQTRQTLP-GLNPAR--SYAPIGRATWSPRLAPARSPP 659
N++ + WP G + L G A+ S +PI RAT SPR P+ PP
Sbjct: 393 NSLEISWPIVQGASGYFLQIGFGDAKEQSVSPIKRATTSPRKQPSIVPP 441
>AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell factor
1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +3
Query: 531 NTITVGWP---GQTRQTLP-GLNPAR--SYAPIGRATWSPRLAPARSPP 659
N++ + WP G + L G A+ S +PI RAT SPR P+ PP
Sbjct: 393 NSLEISWPIVQGASGYFLQIGFGDAKEQSVSPIKRATTSPRKQPSIVPP 441
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,804,605
Number of Sequences: 27780
Number of extensions: 361578
Number of successful extensions: 1185
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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