Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_G10
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ233254-1|ABB71126.1| 1439|Homo sapiens Rab5-activating protein... 31 7.5
BC114962-1|AAI14963.1| 1433|Homo sapiens GAPVD1 protein protein. 31 7.5
BC114937-1|AAI14938.1| 1460|Homo sapiens GAPVD1 protein protein. 31 7.5
BC013635-1|AAH13635.1| 549|Homo sapiens GAPVD1 protein protein. 31 7.5
AL627223-4|CAO03611.1| 1439|Homo sapiens GTPase activating prote... 31 7.5
AL627223-3|CAO03610.1| 1433|Homo sapiens GTPase activating prote... 31 7.5
AL627223-2|CAH71014.2| 1460|Homo sapiens GTPase activating prote... 31 7.5
AB040954-1|BAA96045.3| 1484|Homo sapiens KIAA1521 protein protein. 31 7.5
>DQ233254-1|ABB71126.1| 1439|Homo sapiens Rab5-activating protein 6
protein.
Length = 1439
Score = 30.7 bits (66), Expect = 7.5
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = -2
Query: 447 QQFFNVIYANHRSLKLLASEFVRVAP--KAK*KTTQVEKYTX*R-QYPGIVQ*ISQIVNI 277
Q+ V+ ANHR+L++ ++R AP A+ + + Y R + I++ S I+N+
Sbjct: 1310 QRLSKVVTANHRALQI-PEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNL 1368
Query: 276 LKLSNRNFDVGLDD 235
L L+N + G DD
Sbjct: 1369 LSLANEDSVPGADD 1382
>BC114962-1|AAI14963.1| 1433|Homo sapiens GAPVD1 protein protein.
Length = 1433
Score = 30.7 bits (66), Expect = 7.5
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = -2
Query: 447 QQFFNVIYANHRSLKLLASEFVRVAP--KAK*KTTQVEKYTX*R-QYPGIVQ*ISQIVNI 277
Q+ V+ ANHR+L++ ++R AP A+ + + Y R + I++ S I+N+
Sbjct: 1304 QRLSKVVTANHRALQI-PEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNL 1362
Query: 276 LKLSNRNFDVGLDD 235
L L+N + G DD
Sbjct: 1363 LSLANEDSVPGADD 1376
>BC114937-1|AAI14938.1| 1460|Homo sapiens GAPVD1 protein protein.
Length = 1460
Score = 30.7 bits (66), Expect = 7.5
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = -2
Query: 447 QQFFNVIYANHRSLKLLASEFVRVAP--KAK*KTTQVEKYTX*R-QYPGIVQ*ISQIVNI 277
Q+ V+ ANHR+L++ ++R AP A+ + + Y R + I++ S I+N+
Sbjct: 1331 QRLSKVVTANHRALQI-PEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNL 1389
Query: 276 LKLSNRNFDVGLDD 235
L L+N + G DD
Sbjct: 1390 LSLANEDSVPGADD 1403
>BC013635-1|AAH13635.1| 549|Homo sapiens GAPVD1 protein protein.
Length = 549
Score = 30.7 bits (66), Expect = 7.5
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = -2
Query: 447 QQFFNVIYANHRSLKLLASEFVRVAP--KAK*KTTQVEKYTX*R-QYPGIVQ*ISQIVNI 277
Q+ V+ ANHR+L++ ++R AP A+ + + Y R + I++ S I+N+
Sbjct: 420 QRLSKVVTANHRALQI-PEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNL 478
Query: 276 LKLSNRNFDVGLDD 235
L L+N + G DD
Sbjct: 479 LSLANEDSVPGADD 492
>AL627223-4|CAO03611.1| 1439|Homo sapiens GTPase activating protein
and VPS9 domains 1 protein.
Length = 1439
Score = 30.7 bits (66), Expect = 7.5
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = -2
Query: 447 QQFFNVIYANHRSLKLLASEFVRVAP--KAK*KTTQVEKYTX*R-QYPGIVQ*ISQIVNI 277
Q+ V+ ANHR+L++ ++R AP A+ + + Y R + I++ S I+N+
Sbjct: 1310 QRLSKVVTANHRALQI-PEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNL 1368
Query: 276 LKLSNRNFDVGLDD 235
L L+N + G DD
Sbjct: 1369 LSLANEDSVPGADD 1382
>AL627223-3|CAO03610.1| 1433|Homo sapiens GTPase activating protein
and VPS9 domains 1 protein.
Length = 1433
Score = 30.7 bits (66), Expect = 7.5
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = -2
Query: 447 QQFFNVIYANHRSLKLLASEFVRVAP--KAK*KTTQVEKYTX*R-QYPGIVQ*ISQIVNI 277
Q+ V+ ANHR+L++ ++R AP A+ + + Y R + I++ S I+N+
Sbjct: 1304 QRLSKVVTANHRALQI-PEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNL 1362
Query: 276 LKLSNRNFDVGLDD 235
L L+N + G DD
Sbjct: 1363 LSLANEDSVPGADD 1376
>AL627223-2|CAH71014.2| 1460|Homo sapiens GTPase activating protein
and VPS9 domains 1 protein.
Length = 1460
Score = 30.7 bits (66), Expect = 7.5
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = -2
Query: 447 QQFFNVIYANHRSLKLLASEFVRVAP--KAK*KTTQVEKYTX*R-QYPGIVQ*ISQIVNI 277
Q+ V+ ANHR+L++ ++R AP A+ + + Y R + I++ S I+N+
Sbjct: 1331 QRLSKVVTANHRALQI-PEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNL 1389
Query: 276 LKLSNRNFDVGLDD 235
L L+N + G DD
Sbjct: 1390 LSLANEDSVPGADD 1403
>AB040954-1|BAA96045.3| 1484|Homo sapiens KIAA1521 protein protein.
Length = 1484
Score = 30.7 bits (66), Expect = 7.5
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = -2
Query: 447 QQFFNVIYANHRSLKLLASEFVRVAP--KAK*KTTQVEKYTX*R-QYPGIVQ*ISQIVNI 277
Q+ V+ ANHR+L++ ++R AP A+ + + Y R + I++ S I+N+
Sbjct: 1355 QRLSKVVTANHRALQI-PEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNL 1413
Query: 276 LKLSNRNFDVGLDD 235
L L+N + G DD
Sbjct: 1414 LSLANEDSVPGADD 1427
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,383,810
Number of Sequences: 237096
Number of extensions: 1583955
Number of successful extensions: 1690
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1690
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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