Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_G06
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,675...    36   0.059
07_03_1705 + 28848293-28848321,28848766-28848841,28848940-288490...    28   9.0  

>05_02_0115 -
           6758540-6758771,6759417-6759524,6759670-6759840,
           6759967-6760077,6760562-6760663,6761139-6761366,
           6761568-6761696,6761753-6761869,6761955-6762301,
           6762377-6762931,6763104-6763182,6763429-6763595,
           6763857-6764075,6764956-6765139,6765175-6765371,
           6765717-6766035,6766379-6766538,6767642-6767794,
           6767911-6768013
          Length = 1226

 Score = 35.5 bits (78), Expect = 0.059
 Identities = 17/72 (23%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = +3

Query: 315 GYHVNENCNNVLESILHNILSEDEYLRTYRRSISFGQNVKKDLIPLLIHTKDDKTIEL-L 491
           GY   E+C + L+ +   +  +D   R   + +   +   +DL+P++ + + D+ + +  
Sbjct: 26  GYAKGEHCLDNLKDLQRFLRRDDPQRREVFKQVCKWKIASRDLVPIIENYQADRNLVITA 85

Query: 492 IRILVNLTIPIE 527
           +++LV LT+P+E
Sbjct: 86  VKVLVFLTMPVE 97


>07_03_1705 +
           28848293-28848321,28848766-28848841,28848940-28849082,
           28849297-28849383,28849492-28849575,28850224-28850380,
           28850521-28850606,28850995-28851226,28851351-28851471,
           28851610-28851746,28852086-28852202,28852612-28852660,
           28852751-28852793,28852945-28853116,28853192-28853262,
           28853365-28853458,28853608-28853820,28853851-28853859,
           28853895-28853999,28854266-28854586,28854664-28854789
          Length = 823

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +3

Query: 378 EDEYLRTYRRSISFGQNVKKDLIPLLIHTKDDKTIELLIRILVNLTIPIECLLSVDE 548
           + EYL + +  IS     +K    +L  T + K + L  R   NL     CLL+VDE
Sbjct: 45  KSEYLGSTQTDISVSGQAEKGAFDVLYMTPE-KAVSLPSRFWSNLQAAGICLLAVDE 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,166,003
Number of Sequences: 37544
Number of extensions: 378360
Number of successful extensions: 778
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)