Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_G06
         (914 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050557-1|AAH50557.1| 1208|Homo sapiens timeless homolog (Droso...    64   9e-10
BC039842-1|AAH39842.1|  532|Homo sapiens Similar to timeless hom...    64   9e-10
AF098162-1|AAC80011.1| 1208|Homo sapiens timeless homolog protein.     64   9e-10
AB015597-1|BAA36499.1| 1208|Homo sapiens hTIM1 protein.                64   9e-10

>BC050557-1|AAH50557.1| 1208|Homo sapiens timeless homolog
           (Drosophila) protein.
          Length = 1208

 Score = 63.7 bits (148), Expect = 9e-10
 Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
 Frame = +3

Query: 294 LGFLHADGYHVNENCNNVLESILHNILSEDEYLRTYRRSISFGQNVKKDLIPLLI-HTKD 470
           LG+L  D YH   +C   ++ ++  +  EDE  R  R+ +   Q ++ DL+P+L  H +D
Sbjct: 17  LGYLEGDTYHKEPDCLESVKDLIRYLRHEDE-TRDVRQQLGAAQILQSDLLPILTQHHQD 75

Query: 471 DKTIELLIRILVNLTIPIECLLSVDEISKNDFGRHTIFEINNLLATTKMAFTDQRATKVV 650
               + +IR++VNLT P   LL    + K    RH   ++   L   K AF  ++A  V+
Sbjct: 76  KPLFDAVIRLMVNLTQP--ALLCFGNLPKEPSFRHHFLQVLTYLQAYKEAFASEKAFGVL 133

Query: 651 IDFL 662
            + L
Sbjct: 134 SETL 137


>BC039842-1|AAH39842.1|  532|Homo sapiens Similar to timeless
           homolog (Drosophila) protein.
          Length = 532

 Score = 63.7 bits (148), Expect = 9e-10
 Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
 Frame = +3

Query: 294 LGFLHADGYHVNENCNNVLESILHNILSEDEYLRTYRRSISFGQNVKKDLIPLLI-HTKD 470
           LG+L  D YH   +C   ++ ++  +  EDE  R  R+ +   Q ++ DL+P+L  H +D
Sbjct: 17  LGYLEGDTYHKEPDCLESVKDLIRYLRHEDE-TRDVRQQLGAAQILQSDLLPILTQHHQD 75

Query: 471 DKTIELLIRILVNLTIPIECLLSVDEISKNDFGRHTIFEINNLLATTKMAFTDQRATKVV 650
               + +IR++VNLT P   LL    + K    RH   ++   L   K AF  ++A  V+
Sbjct: 76  KPLFDAVIRLMVNLTQP--ALLCFGNLPKEPSFRHHFLQVLTYLQAYKEAFASEKAFGVL 133

Query: 651 IDFL 662
            + L
Sbjct: 134 SETL 137


>AF098162-1|AAC80011.1| 1208|Homo sapiens timeless homolog protein.
          Length = 1208

 Score = 63.7 bits (148), Expect = 9e-10
 Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
 Frame = +3

Query: 294 LGFLHADGYHVNENCNNVLESILHNILSEDEYLRTYRRSISFGQNVKKDLIPLLI-HTKD 470
           LG+L  D YH   +C   ++ ++  +  EDE  R  R+ +   Q ++ DL+P+L  H +D
Sbjct: 17  LGYLEGDTYHKEPDCLESVKDLIRYLRHEDE-TRDVRQQLGAAQILQSDLLPILTQHHQD 75

Query: 471 DKTIELLIRILVNLTIPIECLLSVDEISKNDFGRHTIFEINNLLATTKMAFTDQRATKVV 650
               + +IR++VNLT P   LL    + K    RH   ++   L   K AF  ++A  V+
Sbjct: 76  KPLFDAVIRLMVNLTQP--ALLCFGNLPKEPSFRHHFLQVLTYLQAYKEAFASEKAFGVL 133

Query: 651 IDFL 662
            + L
Sbjct: 134 SETL 137


>AB015597-1|BAA36499.1| 1208|Homo sapiens hTIM1 protein.
          Length = 1208

 Score = 63.7 bits (148), Expect = 9e-10
 Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
 Frame = +3

Query: 294 LGFLHADGYHVNENCNNVLESILHNILSEDEYLRTYRRSISFGQNVKKDLIPLLI-HTKD 470
           LG+L  D YH   +C   ++ ++  +  EDE  R  R+ +   Q ++ DL+P+L  H +D
Sbjct: 17  LGYLEGDTYHKEPDCLESVKDLIRYLRHEDE-TRDVRQQLGAAQILQSDLLPILTQHHQD 75

Query: 471 DKTIELLIRILVNLTIPIECLLSVDEISKNDFGRHTIFEINNLLATTKMAFTDQRATKVV 650
               + +IR++VNLT P   LL    + K    RH   ++   L   K AF  ++A  V+
Sbjct: 76  KPLFDAVIRLMVNLTQP--ALLCFGNLPKEPSFRHHFLQVLTYLQAYKEAFASEKAFGVL 133

Query: 651 IDFL 662
            + L
Sbjct: 134 SETL 137


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,384,791
Number of Sequences: 237096
Number of extensions: 2299102
Number of successful extensions: 11096
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11092
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)