Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_G06
         (914 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72503-1|CAA96596.2|  617|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AF024493-7|AAS47680.1|   96|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z82060-1|CAB04881.2|  448|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U80838-7|AAC71112.3|  581|Caenorhabditis elegans Hypothetical pr...    28   8.1  
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...    28   8.1  
AC006790-1|AAY55890.1|  309|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z72503-1|CAA96596.2|  617|Caenorhabditis elegans Hypothetical
           protein C26C6.3 protein.
          Length = 617

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/46 (30%), Positives = 29/46 (63%)
 Frame = +3

Query: 573 HTIFEINNLLATTKMAFTDQRATKVVIDFLKKNFDLEQKTMLTIEQ 710
           H+I   N+L++ +  +  D  A  V  +F K++F++E+K + T+E+
Sbjct: 5   HSIILFNSLISISICSKADDPALLVASEF-KEHFNVEEKQLETVEE 49


>AF024493-7|AAS47680.1|   96|Caenorhabditis elegans Hypothetical
           protein F23F1.10 protein.
          Length = 96

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +3

Query: 543 DEISKNDFGRHTIFEINNLLATTKMAFTDQRATKVVIDFLKK 668
           +E+ K+   R  +FEI++ +   ++   +QR T+++ID  KK
Sbjct: 51  EELPKDFESRLELFEISSPIKCVRIPKREQRHTQIIIDEFKK 92


>Z82060-1|CAB04881.2|  448|Caenorhabditis elegans Hypothetical
           protein T27F6.1 protein.
          Length = 448

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 327 NENCNNVLESILHNILSEDEYLRTYRRSISFGQNVKKD 440
           NE+ N   E+++  ILS D  LR     ++F + V  D
Sbjct: 97  NESLNMSCEAVMDRILSRDHVLRPLENGVAFARVVYMD 134


>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 792 KLDSEWE-FSLVCVIYFSAKVGCYLYLYIAQWLTLSF 685
           K++  W   +L   ++F+A +G Y  ++ A+W T+ F
Sbjct: 44  KMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIF 80


>U80838-7|AAC71112.3|  581|Caenorhabditis elegans Hypothetical
           protein F47F6.3 protein.
          Length = 581

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = -2

Query: 409 LLRYVRKYSSSLKILCKIDSRTLLQFSFT*YPSACRKPRFPKLLWICGLLKTHSILFVNM 230
           +L  + KYS SLK L + +   L Q S     +     R  + ++I G L T+S  F+N+
Sbjct: 427 VLFIIAKYSRSLKALIQANDTLLNQIS----ENIEFYERHARKVYILGALPTYSANFLNV 482

Query: 229 FI 224
           F+
Sbjct: 483 FL 484


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 792 KLDSEWE-FSLVCVIYFSAKVGCYLYLYIAQWLTLSF 685
           K++  W   +L   ++F+A +G Y  ++ A+W T+ F
Sbjct: 44  KMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIF 80


>AC006790-1|AAY55890.1|  309|Caenorhabditis elegans Hypothetical
           protein Y49F6B.13 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 312 DGYHVNENCNNVLESILHNILSED 383
           DGY VN NCN V  S++  +   D
Sbjct: 79  DGYFVNGNCNEVSLSVIFKVPGRD 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,967,317
Number of Sequences: 27780
Number of extensions: 393452
Number of successful extensions: 921
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)