Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_G05
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007559-1|AAH07559.1| 218|Homo sapiens eukaryotic translation ... 258 2e-68
BC001031-1|AAH01031.1| 218|Homo sapiens eukaryotic translation ... 258 2e-68
AY245432-1|AAP22070.1| 218|Homo sapiens eukaryotic translation ... 258 2e-68
AF315506-1|AAK01365.1| 218|Homo sapiens ARG134 protein protein. 258 2e-68
AF109355-1|AAQ13503.1| 218|Homo sapiens MSTP001 protein. 258 2e-68
AB019392-1|BAA76626.1| 218|Homo sapiens M9 protein. 258 2e-68
BC007335-1|AAH07335.2| 117|Homo sapiens EIF3S12 protein protein. 130 9e-30
AY271826-1|AAQ01753.1| 417|Homo sapiens ZYG-11A early embryogen... 35 0.46
D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein. 30 9.8
BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein pr... 30 9.8
BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein. 30 9.8
BC005407-1|AAH05407.1| 853|Homo sapiens NUP188 protein protein. 30 9.8
AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa pro... 30 9.8
AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa prot... 30 9.8
>BC007559-1|AAH07559.1| 218|Homo sapiens eukaryotic translation
initiation factor 3, subunit 12 protein.
Length = 218
Score = 258 bits (632), Expect = 2e-68
Identities = 121/213 (56%), Positives = 151/213 (70%), Gaps = 1/213 (0%)
Frame = +1
Query: 157 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 336
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 337 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 516
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 517 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 693
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 694 DGSLIFIANQDENIKTKNITEKIEFDHLAPLMA 792
+ IFI +Q+E+IK KNI EKI+FD ++ +MA
Sbjct: 183 ESGQIFICSQEESIKPKNIVEKIDFDSVSSIMA 215
>BC001031-1|AAH01031.1| 218|Homo sapiens eukaryotic translation
initiation factor 3, subunit 12 protein.
Length = 218
Score = 258 bits (632), Expect = 2e-68
Identities = 121/213 (56%), Positives = 151/213 (70%), Gaps = 1/213 (0%)
Frame = +1
Query: 157 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 336
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 337 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 516
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 517 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 693
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 694 DGSLIFIANQDENIKTKNITEKIEFDHLAPLMA 792
+ IFI +Q+E+IK KNI EKI+FD ++ +MA
Sbjct: 183 ESGQIFICSQEESIKPKNIVEKIDFDSVSSIMA 215
>AY245432-1|AAP22070.1| 218|Homo sapiens eukaryotic translation
initiation factor 3 subunit k protein.
Length = 218
Score = 258 bits (632), Expect = 2e-68
Identities = 121/213 (56%), Positives = 151/213 (70%), Gaps = 1/213 (0%)
Frame = +1
Query: 157 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 336
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 337 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 516
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 517 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 693
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 694 DGSLIFIANQDENIKTKNITEKIEFDHLAPLMA 792
+ IFI +Q+E+IK KNI EKI+FD ++ +MA
Sbjct: 183 ESGQIFICSQEESIKPKNIVEKIDFDSVSSIMA 215
>AF315506-1|AAK01365.1| 218|Homo sapiens ARG134 protein protein.
Length = 218
Score = 258 bits (632), Expect = 2e-68
Identities = 121/213 (56%), Positives = 151/213 (70%), Gaps = 1/213 (0%)
Frame = +1
Query: 157 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 336
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 337 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 516
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 517 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 693
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 694 DGSLIFIANQDENIKTKNITEKIEFDHLAPLMA 792
+ IFI +Q+E+IK KNI EKI+FD ++ +MA
Sbjct: 183 ESGQIFICSQEESIKPKNIVEKIDFDSVSSIMA 215
>AF109355-1|AAQ13503.1| 218|Homo sapiens MSTP001 protein.
Length = 218
Score = 258 bits (632), Expect = 2e-68
Identities = 121/213 (56%), Positives = 151/213 (70%), Gaps = 1/213 (0%)
Frame = +1
Query: 157 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 336
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 337 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 516
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 517 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 693
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 694 DGSLIFIANQDENIKTKNITEKIEFDHLAPLMA 792
+ IFI +Q+E+IK KNI EKI+FD ++ +MA
Sbjct: 183 ESGQIFICSQEESIKPKNIVEKIDFDSVSSIMA 215
>AB019392-1|BAA76626.1| 218|Homo sapiens M9 protein.
Length = 218
Score = 258 bits (632), Expect = 2e-68
Identities = 121/213 (56%), Positives = 151/213 (70%), Gaps = 1/213 (0%)
Frame = +1
Query: 157 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 336
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 337 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 516
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 517 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 693
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 694 DGSLIFIANQDENIKTKNITEKIEFDHLAPLMA 792
+ IFI +Q+E+IK KNI EKI+FD ++ +MA
Sbjct: 183 ESGQIFICSQEESIKPKNIVEKIDFDSVSSIMA 215
>BC007335-1|AAH07335.2| 117|Homo sapiens EIF3S12 protein protein.
Length = 117
Score = 130 bits (313), Expect = 9e-30
Identities = 59/114 (51%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
Frame = +1
Query: 454 IKYLADILEQCDFAQFWNRVHQMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANL 633
I YL D+LE C F FW + + +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +
Sbjct: 1 ILYLGDLLETCHFQAFWQALDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEM 60
Query: 634 LGGIDDVTLKHWVKKYGW-RDDGSLIFIANQDENIKTKNITEKIEFDHLAPLMA 792
LG + D LK W+ KYGW D+ IFI +Q+E+IK KNI EKI+FD ++ +MA
Sbjct: 61 LGDLSDSQLKVWMSKYGWSADESGQIFICSQEESIKPKNIVEKIDFDSVSSIMA 114
>AY271826-1|AAQ01753.1| 417|Homo sapiens ZYG-11A early
embryogenesis protein protein.
Length = 417
Score = 34.7 bits (76), Expect = 0.46
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +1
Query: 289 NLAVLKLYQFNPEKFNADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLA 468
NL L + P + +++TC +L KAL NFPH CLL S+ + + + +
Sbjct: 66 NLTRQGLAKGMPVRLLSEVTC-LLFKALKNFPHYQQLQKNCLL--SLTNSRILVDVPF-- 120
Query: 469 DILEQCDFAQFWNRVHQMPEL 531
D + F W H+ P++
Sbjct: 121 DRFDAAKFVMRWLCKHENPKM 141
>D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein.
Length = 1745
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 389 PILHCASAYFLNPLWKMRQ---FLKSNT*LTFWSNVTLLSFG 505
P+LH A+ FL+ LW+ R+ L T FW N+T FG
Sbjct: 974 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 1015
>BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein
protein.
Length = 1639
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 389 PILHCASAYFLNPLWKMRQ---FLKSNT*LTFWSNVTLLSFG 505
P+LH A+ FL+ LW+ R+ L T FW N+T FG
Sbjct: 868 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 909
>BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein.
Length = 974
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 389 PILHCASAYFLNPLWKMRQ---FLKSNT*LTFWSNVTLLSFG 505
P+LH A+ FL+ LW+ R+ L T FW N+T FG
Sbjct: 203 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 244
>BC005407-1|AAH05407.1| 853|Homo sapiens NUP188 protein protein.
Length = 853
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 389 PILHCASAYFLNPLWKMRQ---FLKSNT*LTFWSNVTLLSFG 505
P+LH A+ FL+ LW+ R+ L T FW N+T FG
Sbjct: 300 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 341
>AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 389 PILHCASAYFLNPLWKMRQ---FLKSNT*LTFWSNVTLLSFG 505
P+LH A+ FL+ LW+ R+ L T FW N+T FG
Sbjct: 978 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 1019
>AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 389 PILHCASAYFLNPLWKMRQ---FLKSNT*LTFWSNVTLLSFG 505
P+LH A+ FL+ LW+ R+ L T FW N+T FG
Sbjct: 978 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 1019
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,005,244
Number of Sequences: 237096
Number of extensions: 2395056
Number of successful extensions: 8032
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8024
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -