Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_G04
         (923 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0698 - 5400401-5401015                                           29   3.9  
09_02_0358 + 7818189-7818368,7818786-7819067                           29   5.2  
12_02_0616 - 21246374-21246462,21246605-21247702,21247800-212481...    29   6.9  
07_03_1692 - 28733184-28733980,28734306-28734373,28734481-287345...    28   9.1  

>01_01_0698 - 5400401-5401015
          Length = 204

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
 Frame = +2

Query: 587 CETCG---RCRCEQCARXRP-LPSRWLCGSCLCSAEACVD 694
           CE CG    C  E   R R     RW+CG C  +A A  D
Sbjct: 86  CECCGMQEECTPEYARRVRERYCGRWVCGLCAAAASAEAD 125


>09_02_0358 + 7818189-7818368,7818786-7819067
          Length = 153

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +2

Query: 170 TSSERSQKTPSSRSEVEINEELQSRKWGR*GNRKATARES 289
           TSS  SQ T SSRSE ++N + Q  K  +   RK + RES
Sbjct: 5   TSSGSSQGTRSSRSEDDLNLQAQMEKKRK--RRKESNRES 42


>12_02_0616 -
           21246374-21246462,21246605-21247702,21247800-21248110,
           21248550-21249251,21252802-21252912,21253396-21253481,
           21253753-21253862,21254085-21254236,21254656-21254765
          Length = 922

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
 Frame = +2

Query: 641 PSRWLCGSCLCSAEACVDYA---SCMCCVKALF 730
           PS W+C +  C A    D      C CC+  LF
Sbjct: 327 PSTWICKNAACKAVLTADNTFCKRCSCCICHLF 359


>07_03_1692 -
           28733184-28733980,28734306-28734373,28734481-28734594,
           28734835-28734884,28735012-28735422,28735534-28735610,
           28736083-28736257,28736843-28736939,28737070-28737833,
           28737900-28738001,28738093-28738174,28739004-28739161
          Length = 964

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 608 RCEQCARXRPLPSRWLCGSCLCSAEACVDYASCMC 712
           +C+ C++ R LP   +  S    A+  +D  SC C
Sbjct: 646 QCDDCSKWRRLPLNVIVASKWTCADNTIDSKSCSC 680


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,515,730
Number of Sequences: 37544
Number of extensions: 279940
Number of successful extensions: 951
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)