Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_G02
         (958 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8WR50 Cluster: Star; n=1; Bombyx mori|Rep: Star - Bomb...    95   2e-18

>UniRef50_Q8WR50 Cluster: Star; n=1; Bombyx mori|Rep: Star - Bombyx
           mori (Silk moth)
          Length = 315

 Score = 95.1 bits (226), Expect = 2e-18
 Identities = 58/97 (59%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
 Frame = +3

Query: 354 PHTPKPNLLDKLVIXXAES-THSPRFTSXAFXKAPXNELYXRLLPVDALMSXHX*LS*RF 530
           P  PKPNL+DKLVI  AE+ THSPRFT  AF KAP NELY RLLP  A++     ++   
Sbjct: 33  PPEPKPNLIDKLVIIFAETKTHSPRFTLPAFMKAPPNELYRRLLP--AMLFVLTFVTVMT 90

Query: 531 S*XTWMQ-VALGAXQFRLXMTRDYXLARIXXDSAALI 638
               +M  VALGA QFRL MTRDY LARI   SAALI
Sbjct: 91  MLLIYMDTVALGAQQFRLNMTRDYELARIGQGSAALI 127



 Score = 41.1 bits (92), Expect = 0.041
 Identities = 20/34 (58%), Positives = 21/34 (61%)
 Frame = +2

Query: 257 MQGIXNEVIMAEXTDHDXXXXXXXXXGQAMDKXP 358
           MQGI N+VIMAE TD D         GQAMDK P
Sbjct: 1   MQGIENKVIMAEKTDQDNPPPPVEEPGQAMDKPP 34


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,350,588
Number of Sequences: 1657284
Number of extensions: 6748273
Number of successful extensions: 7251
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 7135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7249
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88590537959
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)