BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_G01
(949 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 36 0.002
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 34 0.007
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 32 0.029
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 32 0.029
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 31 0.039
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 31 0.051
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 31 0.067
AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakini... 28 0.36
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 28 0.47
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 27 0.83
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 27 1.1
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 25 2.5
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 35.5 bits (78), Expect = 0.002
Identities = 24/89 (26%), Positives = 25/89 (28%)
Frame = +1
Query: 613 PXGXXRXPPXGXRTAPTXPTXXPPPXXLPXXPXGPPXRXAIXXGPXPPPXXPXXPXXAPX 792
P G PP G P PPP L P P + P P P P
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRF----PAGFPNLPNAQPP 582
Query: 793 XRAAPPPPXXXXXXPPXAPPXXXPPXXXP 879
PPPP P P P P
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGPAGSRP 611
Score = 32.3 bits (70), Expect = 0.022
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 658 PTXPTXXPPPXXLPXXPXGPPXRXAIXXGP--XPPPXXPXXPXXAPXXRAAPP 810
P P PPP P P GPP + GP P P P AAPP
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPP-SPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625
Score = 28.7 bits (61), Expect = 0.27
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = +3
Query: 603 PPPPXG-AMXXPPXXXPDRTXXXNXXXPPXXAA--XXPXGAPXPXXNXXRPXPPPXXPXX 773
PPPP G + PP P P A P G P P PPP P
Sbjct: 533 PPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMG 592
Query: 774 P 776
P
Sbjct: 593 P 593
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 33.9 bits (74), Expect = 0.007
Identities = 26/90 (28%), Positives = 31/90 (34%)
Frame = -2
Query: 813 GGGGGPXXGXGXXXXGXXWGGGGAXXNCXXGGGPXRVXGQPXGGGXXXWXGXCGPXAXXG 634
GGGGG G G GGGG+ + GGG + G G G +
Sbjct: 659 GGGGGGSVGSGGIGSSSLGGGGGSGRS-SSGGGMIGMHSVAAGAAVAAGGGVAGMMSTGA 717
Query: 633 GAXXPRXGGXVXPXAPXXXXGSXGXAQGGG 544
G GG + GS G GGG
Sbjct: 718 GVNRGGDGGC---GSIGGEVGSVGGGGGGG 744
Score = 25.0 bits (52), Expect = 3.3
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = -3
Query: 788 GAXXGXXGXXGGGXGPXXIAXRXGGPXGXXGSXXGGGXXVG 666
G G G GG G I G G G GG +G
Sbjct: 653 GGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIG 693
Score = 25.0 bits (52), Expect = 3.3
Identities = 24/87 (27%), Positives = 26/87 (29%)
Frame = -3
Query: 866 GGXXLGGAXGGXXXXXXGGGGAARXXGAXXGXXGXXGGGXGPXXIAXRXGGPXGXXGSXX 687
G LGG GG GGG G GGG ++ G G G
Sbjct: 672 GSSSLGG--GGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVA-GMMSTGAGVNRGGDGGCG 728
Query: 686 GGGXXVGXVGAVRXPXGGXRHXPXGGG 606
G VG VG G GG
Sbjct: 729 SIGGEVGSVGGGGGGGGSSVRDGNNGG 755
Score = 24.6 bits (51), Expect = 4.4
Identities = 22/69 (31%), Positives = 25/69 (36%)
Frame = -2
Query: 813 GGGGGPXXGXGXXXXGXXWGGGGAXXNCXXGGGPXRVXGQPXGGGXXXWXGXCGPXAXXG 634
G GGG G G G G GG + GGG G+ GG G G +
Sbjct: 651 GSGGG---GGGGGGGGGSVGSGGIGSSSLGGGGG---SGRSSSGG-----GMIGMHSVAA 699
Query: 633 GAXXPRXGG 607
GA GG
Sbjct: 700 GAAVAAGGG 708
Score = 23.8 bits (49), Expect = 7.7
Identities = 25/90 (27%), Positives = 27/90 (30%)
Frame = -2
Query: 813 GGGGGPXXGXGXXXXGXXWGGGGAXXNCXXGGGPXRVXGQPXGGGXXXWXGXCGPXAXXG 634
GGGGG G G G GG + GGG R GGG A
Sbjct: 653 GGGGGGGGGGG----GSVGSGGIGSSSLGGGGGSGR---SSSGGGMIGMHSVAAGAAVAA 705
Query: 633 GAXXPRXGGXVXPXAPXXXXGSXGXAQGGG 544
G G + A G G GG
Sbjct: 706 GGG---VAGMMSTGAGVNRGGDGGCGSIGG 732
Score = 23.8 bits (49), Expect = 7.7
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = -3
Query: 851 GGAXGGXXXXXXGGGGAARXXGAXXGXXGXXGGGXGPXXIAXRXGGPXGXXGSXXGGGXX 672
GG GG G GG G G G G + G G G
Sbjct: 655 GGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVAGMMS 714
Query: 671 VGXVGAVRXPXGG 633
G G R GG
Sbjct: 715 TG-AGVNRGGDGG 726
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 31.9 bits (69), Expect = 0.029
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 389 GAGRXGXRAXXPGPXRPPGXXPXXXGGGGGGGXXXEKKTXPXXGXXGGXRG 541
GAG G PG P GGGGGGG + + GG G
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGG 251
Score = 31.1 bits (67), Expect = 0.051
Identities = 27/90 (30%), Positives = 28/90 (31%), Gaps = 3/90 (3%)
Frame = -3
Query: 866 GGXXLGGAXGGXXXXXXGGGGAARXXGAXXGXXGXXGGGXG---PXXIAXRXGGPXGXXG 696
GG GG GG A+ G GGG G P GGP G G
Sbjct: 168 GGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGP-GPGG 226
Query: 695 SXXGGGXXVGXVGAVRXPXGGXRHXPXGGG 606
GGG R GG GGG
Sbjct: 227 GGGGGGRDRDHRDRDREREGGGNGGGGGGG 256
Score = 27.5 bits (58), Expect = 0.63
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +2
Query: 383 GGGAGRXGXRAXXPGPXRPPGXXPXXXGGGGGGGXXXEKKTXPXXGXXGGXRG 541
G G G G A G G P GGGGG + G G G
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGG 253
Score = 25.4 bits (53), Expect = 2.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 390 GPGGXXNGXXXRGXXXPRARXRCXXXGGGGGG 485
GPGG G R R R GGGGG
Sbjct: 223 GPGGGGGGGGRDRDHRDRDREREGGGNGGGGG 254
Score = 24.6 bits (51), Expect = 4.4
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -3
Query: 878 GXXXGGXXLGGAXGGXXXXXXGGGGAARXXGAXXGXXGXXGGGXG 744
G G GG G GGGG R GGG G
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNG 250
Score = 24.2 bits (50), Expect = 5.8
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 383 GGGAGRXGXRAXXPGPXRPPGXXPXXXGGGGGGG 484
GGG+G P GGGGGGG
Sbjct: 144 GGGSGAIHASPNAQNPSSGGRSSSGGGGGGGGGG 177
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 31.9 bits (69), Expect = 0.029
Identities = 23/80 (28%), Positives = 25/80 (31%), Gaps = 3/80 (3%)
Frame = +1
Query: 634 PPXGXRTAPTXPTXXPP-PXXLPXXPXGPPXRXAIXXGPXPPPXXPXXPXXAPXXRAAPP 810
PP + P PP P +P P PP GP PPP P P
Sbjct: 71 PPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMG-PNGPLPPPMMGMRPPPMMVPTMGMP 129
Query: 811 PPXXXXXXP--PXAPPXXXP 864
P P APP P
Sbjct: 130 PMGLGMRPPVMSAAPPQLNP 149
Score = 24.6 bits (51), Expect = 4.4
Identities = 18/73 (24%), Positives = 21/73 (28%)
Frame = +1
Query: 649 RTAPTXPTXXPPPXXLPXXPXGPPXRXAIXXGPXPPPXXPXXPXXAPXXRAAPPPPXXXX 828
+ AP T PP + PP + P P P P PPP
Sbjct: 61 KIAPNPFTAGPPKPNISI----PPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGM 116
Query: 829 XXPPXAPPXXXPP 867
PP P P
Sbjct: 117 RPPPMMVPTMGMP 129
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 31.5 bits (68), Expect = 0.039
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = -2
Query: 879 GXXXXGXXXGGRXGXVXXXXXXGGGGGPXXGXGXXXXGXXWGGGGAXXNCXXGGGP 712
G G GGR G GGG G G G G +GGGG GG P
Sbjct: 58 GGGDDGYGGGGRGGR----GGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNGDGGRP 109
Score = 31.1 bits (67), Expect = 0.051
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -3
Query: 878 GXXXGGXXLGGAXGGXXXXXXGGGGAARXXGAXXGXXGXXGGGXG 744
G G GG G GG G R G G G GGG G
Sbjct: 56 GYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYG 100
Score = 27.5 bits (58), Expect = 0.63
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 386 GGAGRXGXRAXXPGPXRPPGXXPXXXGGGGGGGXXXEK 499
GG GR G G R G GGG GGG ++
Sbjct: 65 GGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDR 102
Score = 27.1 bits (57), Expect = 0.83
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 383 GGGAGRXGXRAXXPGPXRPPGXXPXXXGGGGGG 481
GGG G G R G R G G GGGG
Sbjct: 66 GGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98
Score = 24.6 bits (51), Expect = 4.4
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 812 GGGAARXXGAXXGXXGXXGGGXGPXXIAXRXGGPXGXXGSXXGG 681
GGG G G G GGG G GG G G GG
Sbjct: 58 GGGDDGYGGGGRGGRGGRGGGRGR---GRGRGGRDGGGGFGGGG 98
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 31.1 bits (67), Expect = 0.051
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Frame = +2
Query: 608 PPXRGXXAP-PXXAXGPHXPXQXXXPPPXGCPXTRXGP---PPXXQXXQAPPPPXXXPXX 775
PP G P P P P PP P + G PP Q Q PP P
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQM----PPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPI 266
Query: 776 XXPXPXXGPPP 808
P P GP P
Sbjct: 267 RPPNPMGGPRP 277
Score = 25.0 bits (52), Expect = 3.3
Identities = 16/55 (29%), Positives = 17/55 (30%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 GPPPXXQXXQAP----PPPXXXPXXXXPXPXXGPPPPPXXXXXXTXPXRPPXXXP 865
G PP Q + P PP P P G P P P PP P
Sbjct: 184 GMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVP 238
Score = 25.0 bits (52), Expect = 3.3
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = -3
Query: 485 TPPPPPXPXAXXPXPGXAXAPXXXPVXPXARP 390
T P PP P P P P + P A P
Sbjct: 207 TQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVP 238
Score = 25.0 bits (52), Expect = 3.3
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -2
Query: 429 GPGXXARXPXRPAPPPXXXXXXRKPIFXSLIXGGGXAP 316
GPG R P+ PP KP L GG P
Sbjct: 391 GPGIGEREKSNPSRPPSVAGSYGKPNDHELDSSGGRPP 428
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 30.7 bits (66), Expect = 0.067
Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = -3
Query: 815 GGGGAARXXGAXX-GXXGXXGGG-XGPXXIAXRXGG---PXGXXGSXXGGGXXVGXVGA 654
GGGG+ G+ G G GGG GP GG G G GGG G VGA
Sbjct: 519 GGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGGVGA 577
Score = 28.3 bits (60), Expect = 0.36
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 813 GGGGGPXXGXGXXXXGXXWGGGGAXXNCXXGGGPXR 706
GG GGP G G GGGG+ G R
Sbjct: 842 GGAGGPLRGSSGGAGGGSSGGGGSGGTSGGGSSTTR 877
Score = 26.6 bits (56), Expect = 1.1
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = -2
Query: 813 GGGGGPXXGXGXXXXG-XXWGGGGAXXNCXXGGGPXRVXGQPXGGGXXXWXGXCGPXAXX 637
GGGGG G G GGG+ G G V GGG G G
Sbjct: 518 GGGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGGVGA 577
Query: 636 GGA 628
GA
Sbjct: 578 TGA 580
Score = 26.6 bits (56), Expect = 1.1
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = -3
Query: 851 GGAXGGXXXXXXGGGGAARXXGAXXGXXGXXGGGXGPXXIAXRXGGPXGXXGSXXGGGXX 672
GG GG GGG G G GGG G G G G GG
Sbjct: 812 GGNGGGGGAGASGGGFLIT--GDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTS 869
Query: 671 VGXVGAVR 648
G R
Sbjct: 870 GGGSSTTR 877
Score = 25.8 bits (54), Expect = 1.9
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -2
Query: 840 GXVXXXXXXGGGGGPXXGXGXXXX-GXXWGGGGAXXNCXXGG 718
G V GGG G G G G +GGGG + GG
Sbjct: 674 GAVGGGSGAGGGAGSSGGSGGGLASGSPYGGGGHHLSHHHGG 715
Score = 25.0 bits (52), Expect = 3.3
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 464 GGGGGGGXXXEKKTXPXXGXXGGXRGXP 547
GGGGG G +T G GG P
Sbjct: 518 GGGGGSGCVNGSRTVGAGGMAGGGSDGP 545
Score = 25.0 bits (52), Expect = 3.3
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -3
Query: 866 GGXXLGGAXGGXXXXXXGGG-GAARXXGAXXGXXGXXGGGXG 744
GG GG+ G GG G+ G G G GGG G
Sbjct: 535 GGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGGVG 576
Score = 25.0 bits (52), Expect = 3.3
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -3
Query: 851 GGAXGGXXXXXXGGGGAARXXGAXXGXXGXXGGGXGPXXIAXRXGGPXGXXG 696
GGA GG GGGA G+ G G G ++ GG G
Sbjct: 673 GGAVGG---GSGAGGGAGSSGGSGGGLASGSPYGGGGHHLSHHHGGAAAATG 721
Score = 25.0 bits (52), Expect = 3.3
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2
Query: 783 GXXXXGXXWGGGGAXXNCXXGGGPXRVXGQPXGGG 679
G G GGGA + GGG G P GGG
Sbjct: 673 GGAVGGGSGAGGGAGSSGGSGGG--LASGSPYGGG 705
>AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakinin
GPCR protein.
Length = 634
Score = 28.3 bits (60), Expect = 0.36
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = -3
Query: 755 GGXGPXXIAXRXGGPXGXXGSXXGGGXXVGXVGAVRXPXGGXRHXP 618
GG G G G G+ G G G P GG RH P
Sbjct: 325 GGQGSSVGGAPTGAAAGSVGTASGEQHCTGDTGKPPKPPGGKRHEP 370
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 27.9 bits (59), Expect = 0.47
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -3
Query: 485 TPPPPPXPXAXXPXPGXAXAPXXXPVXPXARPP 387
TP PPP P P P PV P P
Sbjct: 802 TPTPPPLPATAEPMGDYMIQPSNIPVHPYCNVP 834
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 27.1 bits (57), Expect = 0.83
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 425 GPXRPPGXXPXXXGGGGGGG 484
GP P G GGGGGGG
Sbjct: 539 GPVGPAGVGGGGGGGGGGGG 558
Score = 24.2 bits (50), Expect = 5.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 428 PXRPPGXXPXXXGGGGGGG 484
P P G GGGGGGG
Sbjct: 537 PNGPVGPAGVGGGGGGGGG 555
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 26.6 bits (56), Expect = 1.1
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = -3
Query: 518 PPXGXFFSXXXTPPPPPXPXAXXPXPGXAXAP 423
P F +PPPPP P PG P
Sbjct: 771 PSRSAFADGIGSPPPPPPPPPSSLSPGGVPRP 802
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 25.4 bits (53), Expect = 2.5
Identities = 16/57 (28%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +3
Query: 603 PPPPXGAMXXPPXXXPDRTXXXNXXXPPXXAAXXPXGAPXPXXNXXRP--XPPPXXP 767
PPP PP P RT + P A + RP PPP P
Sbjct: 629 PPPSAYQQQQPPVVPPPRTNSQSQASEPTPALPPRADRDSKPSSRDRPKDLPPPPIP 685
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,049
Number of Sequences: 2352
Number of extensions: 13346
Number of successful extensions: 278
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103776201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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