Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_F24
(909 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 28 0.088
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 22 7.6
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 7.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 7.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 7.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 7.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 7.6
AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 22 7.6
AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 22 7.6
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 28.3 bits (60), Expect = 0.088
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 683 RNNFSIRYWSWNYRGCWHQTC 621
R+NF + WNY CW C
Sbjct: 746 RHNFKGLHLDWNYPVCWQSNC 766
Score = 23.4 bits (48), Expect = 2.5
Identities = 8/25 (32%), Positives = 9/25 (36%)
Frame = -2
Query: 695 ELFNRNNFSIRYWSWNYRGCWHQTC 621
+ NNF W Y CW C
Sbjct: 1930 DFIETNNFDGLDLDWEYPKCWQVDC 1954
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 373 RHLKDASPVLDHAICKSYPDSSKLTTSDARP 281
RH+K A PV+ + C S++L P
Sbjct: 68 RHIKGAIPVVSLSTCSMLCGSTQLWPQPTGP 98
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 49 PG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 180
PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 183 PGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 49 PG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 180
PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 183 PGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 49 PG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 180
PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 183 PGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 49 PG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 180
PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 183 PGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 49 PG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 180
PG +YAC + + V+ +RR + +++VP +L+S
Sbjct: 183 PGKKNTIVYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like
protein protein.
Length = 242
Score = 21.8 bits (44), Expect = 7.6
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = -3
Query: 796 GVFRTPAHRRYAPQTCQYHRGCGAPTARRTNATTSFLTATI 674
G+ T + Y P Y G G A R T TAT+
Sbjct: 59 GLQPTTGYYPYDPALAAYGYGAGYDLAARRKNATRESTATL 99
>AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor
candidate 33 protein.
Length = 321
Score = 21.8 bits (44), Expect = 7.6
Identities = 5/16 (31%), Positives = 9/16 (56%)
Frame = -2
Query: 674 FSIRYWSWNYRGCWHQ 627
+++ YW Y WH+
Sbjct: 117 YAVYYWRQQYEDFWHR 132
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,237
Number of Sequences: 336
Number of extensions: 4367
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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