Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_F22
(1008 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 34 0.21
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 34 0.21
12_02_0640 - 21447470-21448309 33 0.27
12_02_0635 - 21430245-21431156 33 0.27
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.48
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 32 0.63
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.83
09_04_0258 - 16175258-16176069,16176111-16176414 31 1.5
11_01_0252 + 1934505-1935032,1936001-1936957 31 1.9
01_03_0005 + 11568545-11569119,11569179-11569191 31 1.9
12_01_0252 + 1868670-1869200,1870167-1871120 30 2.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 2.5
02_05_0149 + 26290236-26290880 30 2.5
11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802... 30 3.4
06_03_1310 + 29238644-29240260 30 3.4
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 29 5.9
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 29 5.9
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248... 29 5.9
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243... 29 7.8
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 29 7.8
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 33.9 bits (74), Expect = 0.21
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -1
Query: 321 PGXGGRPXPXXXGXAXXGPPPPXXPXGXXXARPXCF 214
PG G P P G GPPPP P G P F
Sbjct: 366 PGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPPPF 401
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 640 GTXPPPXPXGXGXEAPPXPXXAWGPRLWG 554
G PPP G G PP P GPR G
Sbjct: 369 GPPPPPGAAGRGGGGPPPPALPGGPRARG 397
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 33.9 bits (74), Expect = 0.21
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +1
Query: 247 RXXGGGGPAXGAAXXXWXGPPPXPGXGXXXRGXPFGVSGPWXXWGG 384
R GGG G GPPP PG G G P G G GG
Sbjct: 445 RGGQGGGYGSGPYPQQGRGPPPYPGGGMGGAGGPRGGGGSGYGVGG 490
>12_02_0640 - 21447470-21448309
Length = 279
Score = 33.5 bits (73), Expect = 0.27
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = -2
Query: 392 RAAPPHXXQGPDTPKGXPRXQXPXPGXGGGPXXXXXAAPXAGPPPPXXRXXG 237
R PP + P P+G PR P PG P PP R G
Sbjct: 210 RTPPPERRESPSPPRGRPRTPPPPPGSPKKPATPGAVVVEQPGPPTDHREAG 261
>12_02_0635 - 21430245-21431156
Length = 303
Score = 33.5 bits (73), Expect = 0.27
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = -2
Query: 392 RAAPPHXXQGPDTPKGXPRXQXPXPGXGGGPXXXXXAAPXAGPPPPXXRXXG 237
R PP + P P+G PR P PG P PP R G
Sbjct: 207 RTPPPERRESPSPPRGRPRTPPPPPGSPKKPATPGAVVVEQPGPPTDHREAG 258
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 32.7 bits (71), Expect = 0.48
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +2
Query: 224 GRAXXXPXGXXGGGGPXXAXPXXXGXG--RPPXPG 322
G P G GGGGP P G G RPP PG
Sbjct: 102 GGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPG 136
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 570 PQAXXGXGGASXPXPXGXGGGXVP 641
P G GGA P P G GGG P
Sbjct: 121 PPGAGGGGGARPPAPGGGGGGGAP 144
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 32.3 bits (70), Expect = 0.63
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -2
Query: 383 PPHXXQGPDTPKGXPRXQXPXPGXGGGPXXXXXAAPXAGPPPPXXRXXGXXPG 225
PP GP P+ P P P P GPPPP PG
Sbjct: 23 PPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPG 75
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.9 bits (69), Expect = 0.83
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -2
Query: 383 PPHXXQGPDTPKGXPRXQXPXPGXGGGPXXXXXAAPXAGPPPPXXRXXGXXP 228
PP P PKG P P P G P P PPPP G P
Sbjct: 331 PPKAAPPPPPPKGPP----PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 543 PPVPPQSRGPQAXXGXGGASXPXPXGXGG--GXVPP 644
PP PP ++GP G S P P GG G PP
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = -2
Query: 389 AAPPHXXQGPDTP---KGXPRXQXPXPGXGGGPXXXXXAAPXAGPPPPXXRXXGXXP 228
A PP +GP P KG P P P P GPPPP + P
Sbjct: 335 APPPPPPKGPPPPPPAKGPP--PPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRP 389
>09_04_0258 - 16175258-16176069,16176111-16176414
Length = 371
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -3
Query: 643 GGTXPPPXPXGXGXEAPPXPXXAWG-PRLWGG 551
GG PPP P G PP P G P + GG
Sbjct: 219 GGASPPPLPVRVGASTPPPPHGGAGLPEVGGG 250
>11_01_0252 + 1934505-1935032,1936001-1936957
Length = 494
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 543 PPVPPQSRGPQAXXGXGGASXPXPXGXGGGXVPP 644
PP PP P A G GG+ G GGG P
Sbjct: 64 PPPPPPLNWPMAGGGGGGSGGGGRGGAGGGGGAP 97
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 522 GFFLXAXPPVPPQSRGPQAXXGXGGASXPXPXGXGGG 632
G + PP P G + G GG P P G GGG
Sbjct: 86 GTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGG 122
>12_01_0252 + 1868670-1869200,1870167-1871120
Length = 494
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 543 PPVPPQSRGPQAXXGXGGASXPXPXGXGGGXVPP 644
PP PP P A G GG+ G GGG P
Sbjct: 65 PPPPPPLNWPTAGGGGGGSGGGGRGGAGGGGGAP 98
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 2.5
Identities = 24/65 (36%), Positives = 24/65 (36%), Gaps = 7/65 (10%)
Frame = -2
Query: 398 HGRAAPPHXXQ-------GPDTPKGXPRXQXPXPGXGGGPXXXXXAAPXAGPPPPXXRXX 240
HG APP GP TP G P P PG GGP PPPP R
Sbjct: 1179 HGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMP-PGVPGGP-----------PPPPGGRGL 1226
Query: 239 GXXPG 225
PG
Sbjct: 1227 PAPPG 1231
>02_05_0149 + 26290236-26290880
Length = 214
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +1
Query: 259 GGGPAXGAAXXXWXGPPPXPG-XGXXXRGXPFGVSGPW-XXWGGAARP 396
G G GAA GPP PG G G G W WG AA P
Sbjct: 37 GEGDGAGAAEPGKTGPPLPPGWKGGSGSGQGSSPDGAWRYGWGWAASP 84
>11_02_0073 -
8020401-8020512,8020594-8020679,8020761-8020921,
8021196-8021400,8021664-8021697,8022352-8022422,
8023363-8023542,8023625-8023765,8023859-8023975,
8024074-8024469
Length = 500
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 242 PXGXXGGGGPXXAXPXXXGXGRPPXPGRXAXPVVXP 349
P G GGGGP P G G P G P+V P
Sbjct: 422 PYGAYGGGGPGFNQPMIYGRG-PAPAGMRMVPMVLP 456
>06_03_1310 + 29238644-29240260
Length = 538
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = -2
Query: 383 PPHXXQGPDTPKGXPRXQXPXPGXGGG--PXXXXXAAPXAGPPPP 255
P H P TP P P GGG P + PPPP
Sbjct: 467 PGHHAPVPGTPSSPPSSSWSPPQGGGGKLPFPPVHGVAYSSPPPP 511
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 392 RAAPPHXXQGPDTPKGXPRXQXPXPGXGGGPXXXXXAAPXAGPPPPXXRXXGXXPG 225
RA PP P P P P GG P A G PP R G G
Sbjct: 67 RAPPPPPSHHERAPSDAPPPPPPAPYAGGSPYHRHAAG--GGETPPARRGGGRTSG 120
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = -2
Query: 392 RAAPPHXXQGPDTPKGXPRXQXPXPGXGGGPXXXXXAAPXAGPPPP 255
R+ P +G P + P G GG P A PPPP
Sbjct: 21 RSKPRFDRRGGPNPNNSYHRRGPPGGGGGDRRGGFQLPPDAAPPPP 66
>05_04_0173 +
18724367-18724476,18724570-18724651,18724750-18724840,
18725060-18725172,18725270-18725342,18725445-18725565,
18725665-18725782,18726609-18726748,18726824-18726881,
18727007-18727077,18727181-18727733
Length = 509
Score = 29.1 bits (62), Expect = 5.9
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = +1
Query: 229 GXXPXXRXXGGGGPAXGAAXXXWXG---PPPXPGXGXXXRGXPFGVSGPWXXWGGAA 390
G P GGGG + G A G PPP PG G G P G G +GG +
Sbjct: 420 GGYPNRGGQGGGG-SYGNAPYPQQGRGPPPPYPGSGMAGTGGPRG--GVGGGYGGGS 473
>09_01_0165 -
2436769-2437442,2438159-2438224,2438318-2438415,
2439856-2440214
Length = 398
Score = 28.7 bits (61), Expect = 7.8
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -2
Query: 377 HXXQGPDTPKGXPRXQXPXPGXGGGPXXXXXAAPXAGPPPPXXRXXGXXP 228
H Q D P G P PG GP A P PPPP G P
Sbjct: 228 HNFQNRDVPPGQGFNSPPPPGQ--GPVLPRDAPPM--PPPPSPPNPGAPP 273
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 543 PPVPPQSRGPQAXXGXGGASXPXPXGXGGG 632
PP P Q RGP+ G++ P G GG
Sbjct: 44 PPAPKQHRGPRPAPRNPGSAKPLTAGVPGG 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.148 0.528
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,967,322
Number of Sequences: 37544
Number of extensions: 326377
Number of successful extensions: 1564
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2963829220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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