BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_F20
(902 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071034-1|AAL48656.1| 141|Drosophila melanogaster RE11908p pro... 69 7e-12
AE014297-2114|AAF55254.1| 141|Drosophila melanogaster CG5268-PA... 69 7e-12
AJ278732-1|CAC20095.1| 141|Drosophila melanogaster hypothetical... 65 1e-10
AY113329-1|AAM29334.1| 169|Drosophila melanogaster AT29287p pro... 62 8e-10
AE014298-1063|AAF46276.2| 169|Drosophila melanogaster CG1409-PA... 62 8e-10
BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p pro... 31 1.6
AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA... 31 1.6
AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-P... 31 1.6
AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein. 31 1.6
AE014298-2877|AAF48974.1| 348|Drosophila melanogaster CG14218-P... 31 2.2
AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p pro... 30 3.8
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA... 30 3.8
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB... 30 3.8
AE014296-3444|AAF51657.1| 98|Drosophila melanogaster CG11458-P... 30 3.8
U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino pro... 30 5.0
BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p pro... 30 5.0
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro... 30 5.0
AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p pro... 30 5.0
AE014298-1194|AAF46386.3| 1195|Drosophila melanogaster CG11219-P... 30 5.0
AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,... 30 5.0
AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,... 30 5.0
AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,... 30 5.0
AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,... 30 5.0
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 29 6.6
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 29 6.6
AY089686-1|AAL90424.1| 95|Drosophila melanogaster RH62702p pro... 29 8.7
>AY071034-1|AAL48656.1| 141|Drosophila melanogaster RE11908p
protein.
Length = 141
Score = 69.3 bits (162), Expect = 7e-12
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Frame = +2
Query: 275 EAMQILNIEKV-DPEKISKNYEHLFAVNDKSKGGSFYLQSKIVXAXXRLDAELK--QTSP 445
EA QILNI+ + + I+KNYEHLF VN++SKGGSFY+QSK+ A RLD E+K +
Sbjct: 60 EAKQILNIDDPKNVDAITKNYEHLFQVNERSKGGSFYIQSKVFRAKERLDHEIKAHEQPR 119
Query: 446 NSEQGPSKDTS*DS 487
+S ++DT+ +S
Sbjct: 120 SSNTEAAQDTAEES 133
Score = 59.7 bits (138), Expect = 5e-09
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +3
Query: 96 MAKYIAQIIVLGAQVVGRAFARALKQEIAASQE 194
MAKYIAQIIVLGAQ VGRAF +AL+QEIAASQE
Sbjct: 1 MAKYIAQIIVLGAQAVGRAFTKALRQEIAASQE 33
>AE014297-2114|AAF55254.1| 141|Drosophila melanogaster CG5268-PA
protein.
Length = 141
Score = 69.3 bits (162), Expect = 7e-12
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Frame = +2
Query: 275 EAMQILNIEKV-DPEKISKNYEHLFAVNDKSKGGSFYLQSKIVXAXXRLDAELK--QTSP 445
EA QILNI+ + + I+KNYEHLF VN++SKGGSFY+QSK+ A RLD E+K +
Sbjct: 60 EAKQILNIDDPKNVDAITKNYEHLFQVNERSKGGSFYIQSKVFRAKERLDHEIKAHEQPR 119
Query: 446 NSEQGPSKDTS*DS 487
+S ++DT+ +S
Sbjct: 120 SSNTEAAQDTAEES 133
Score = 59.7 bits (138), Expect = 5e-09
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +3
Query: 96 MAKYIAQIIVLGAQVVGRAFARALKQEIAASQE 194
MAKYIAQIIVLGAQ VGRAF +AL+QEIAASQE
Sbjct: 1 MAKYIAQIIVLGAQAVGRAFTKALRQEIAASQE 33
>AJ278732-1|CAC20095.1| 141|Drosophila melanogaster hypothetical
protein protein.
Length = 141
Score = 65.3 bits (152), Expect = 1e-10
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Frame = +2
Query: 275 EAMQILNIEKV-DPEKISKNYEHLFAVNDKSKGGSFYLQSKIVXAXXRLDAELK--QTSP 445
EA QILNI+ + + I+KNYEHLF V ++SKGGSFY+QSK+ A RLD E+K +
Sbjct: 60 EAKQILNIDDPKNVDAITKNYEHLFHVIERSKGGSFYIQSKVFRAKERLDHEIKAHEQPR 119
Query: 446 NSEQGPSKDTS*DS 487
+S ++DT+ +S
Sbjct: 120 SSNTEAAQDTAEES 133
Score = 59.7 bits (138), Expect = 5e-09
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +3
Query: 96 MAKYIAQIIVLGAQVVGRAFARALKQEIAASQE 194
MAKYIAQIIVLGAQ VGRAF +AL+QEIAASQE
Sbjct: 1 MAKYIAQIIVLGAQAVGRAFTKALRQEIAASQE 33
>AY113329-1|AAM29334.1| 169|Drosophila melanogaster AT29287p
protein.
Length = 169
Score = 62.5 bits (145), Expect = 8e-10
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 275 EAMQILNIEKV-DPEKISKNYEHLFAVNDKSKGGSFYLQSKIVXAXXRLDAELKQT 439
EA QIL++ + + + I +Y+HLF VNDKS GGSFY+QSK+ A R+D EL++T
Sbjct: 80 EAQQILDVSDLTNRQAIDTHYQHLFRVNDKSTGGSFYIQSKVFRAKERIDQELERT 135
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/33 (54%), Positives = 28/33 (84%)
Frame = +3
Query: 96 MAKYIAQIIVLGAQVVGRAFARALKQEIAASQE 194
MA+Y+AQII+LGAQ+VGRA + ++QE+ A ++
Sbjct: 20 MARYLAQIIILGAQLVGRALVKTMRQELQAFED 52
>AE014298-1063|AAF46276.2| 169|Drosophila melanogaster CG1409-PA
protein.
Length = 169
Score = 62.5 bits (145), Expect = 8e-10
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 275 EAMQILNIEKV-DPEKISKNYEHLFAVNDKSKGGSFYLQSKIVXAXXRLDAELKQT 439
EA QIL++ + + + I +Y+HLF VNDKS GGSFY+QSK+ A R+D EL++T
Sbjct: 80 EAQQILDVSDLTNRQAIDTHYQHLFRVNDKSTGGSFYIQSKVFRAKERIDQELERT 135
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/33 (54%), Positives = 28/33 (84%)
Frame = +3
Query: 96 MAKYIAQIIVLGAQVVGRAFARALKQEIAASQE 194
MA+Y+AQII+LGAQ+VGRA + ++QE+ A ++
Sbjct: 20 MARYLAQIIILGAQLVGRALVKTMRQELQAFED 52
>BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p
protein.
Length = 592
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXP 883
PPPP PPP P H + P P PP+ + P
Sbjct: 154 PPPPPPPPPPPPPPPPHSHPHSHHPHPPIV-TPPIIVPIPLPP 195
>AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA
protein.
Length = 594
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXP 883
PPPP PPP P H + P P PP+ + P
Sbjct: 156 PPPPPPPPPPPPPPPPHSHPHSHHPHPPIV-TPPIIVPIPLPP 197
>AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-PA
protein.
Length = 1644
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQPXXS 900
PP P PP + A PPP PP GG PP P S
Sbjct: 271 PPPP---PPPMAPAAPPPPPPPINGAAPPPPPPPMINGGALPPPPPPPS 316
>AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein.
Length = 1644
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQPXXS 900
PP P PP + A PPP PP GG PP P S
Sbjct: 271 PPPP---PPPMAPAAPPPPPPPINGAAPPPPPPPMINGGALPPPPPPPS 316
>AE014298-2877|AAF48974.1| 348|Drosophila melanogaster CG14218-PA
protein.
Length = 348
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXG 868
PPPP PPP+ P R R R P P G
Sbjct: 171 PPPPPPPPPPTAPPRPRPRPRPRPQQPDPQQRRPAQLG 208
>AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p
protein.
Length = 846
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXPP 886
P PPT PPP P P PA PP PP
Sbjct: 178 PAPPTVEPPPPPPPAPTKVEPPPPPAPAEVEPPPPPAPTELEPP 221
>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
isoform A protein.
Length = 1109
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXPP 886
P PPT PPP P P PA PP PP
Sbjct: 441 PAPPTVEPPPPPPPAPTKVEPPPPPAPAEVEPPPPPAPTELEPP 484
>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
isoform B protein.
Length = 1150
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXPP 886
P PPT PPP P P PA PP PP
Sbjct: 441 PAPPTVEPPPPPPPAPTKVEPPPPPAPAEVEPPPPPAPTELEPP 484
>AE014296-3444|AAF51657.1| 98|Drosophila melanogaster CG11458-PA
protein.
Length = 98
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -3
Query: 885 GGXXXTPXXRGG*PAXAGXGXXARRRXWXRXGXEGGGXXVGGGG 754
GG +GG G G + W + G GGG GGGG
Sbjct: 21 GGGGGGGGGQGGWQKNGGGGGGGGQGGWQKGGGGGGGGKHGGGG 64
>U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino
protein.
Length = 1058
Score = 29.9 bits (64), Expect = 5.0
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPP 856
PPPP PPP P + P P +G P
Sbjct: 500 PPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAP 533
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +1
Query: 754 PPXPXXRPPXLXX--AXXPPPXSRXXSXXXXXGSPPS-XXGGXSXPPQP 891
PP P PP L A PPP S PP+ GG PP P
Sbjct: 503 PPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPP 551
>BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p
protein.
Length = 1153
Score = 29.9 bits (64), Expect = 5.0
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPP 856
PPPP PPP P + P P +G P
Sbjct: 595 PPPPPPPPPPPPPMANYGAPPPPPPPPPGSGSAP 628
>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
protein.
Length = 1286
Score = 29.9 bits (64), Expect = 5.0
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPP 856
PPPP PPP P + P P +G P
Sbjct: 728 PPPPPPPPPPPPPMANYGAPPPPPPPPPGSGSAP 761
>AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p
protein.
Length = 1049
Score = 29.9 bits (64), Expect = 5.0
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPP 856
PPPP PPP P + P P +G P
Sbjct: 491 PPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAP 524
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +1
Query: 754 PPXPXXRPPXLXX--AXXPPPXSRXXSXXXXXGSPPS-XXGGXSXPPQP 891
PP P PP L A PPP S PP+ GG PP P
Sbjct: 494 PPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPP 542
>AE014298-1194|AAF46386.3| 1195|Drosophila melanogaster CG11219-PA
protein.
Length = 1195
Score = 29.9 bits (64), Expect = 5.0
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 758 PPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXPPN 889
PP PPP P R +R P A PPL PP+
Sbjct: 896 PPSESPPPPPLPQRRPPTKRPATPPIYDAVPPPLPVSKPPPPPS 939
>AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,
isoform A protein.
Length = 1059
Score = 29.9 bits (64), Expect = 5.0
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPP 856
PPPP PPP P + P P +G P
Sbjct: 501 PPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAP 534
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +1
Query: 754 PPXPXXRPPXLXX--AXXPPPXSRXXSXXXXXGSPPS-XXGGXSXPPQP 891
PP P PP L A PPP S PP+ GG PP P
Sbjct: 504 PPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPP 552
>AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,
isoform B protein.
Length = 1049
Score = 29.9 bits (64), Expect = 5.0
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPP 856
PPPP PPP P + P P +G P
Sbjct: 491 PPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAP 524
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +1
Query: 754 PPXPXXRPPXLXX--AXXPPPXSRXXSXXXXXGSPPS-XXGGXSXPPQP 891
PP P PP L A PPP S PP+ GG PP P
Sbjct: 494 PPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPP 542
>AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,
isoform D protein.
Length = 1207
Score = 29.9 bits (64), Expect = 5.0
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPP 856
PPPP PPP P + P P +G P
Sbjct: 649 PPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAP 682
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +1
Query: 754 PPXPXXRPPXLXX--AXXPPPXSRXXSXXXXXGSPPS-XXGGXSXPPQP 891
PP P PP L A PPP S PP+ GG PP P
Sbjct: 652 PPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPP 700
>AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,
isoform C protein.
Length = 1154
Score = 29.9 bits (64), Expect = 5.0
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPP 856
PPPP PPP P + P P +G P
Sbjct: 596 PPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAP 629
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +1
Query: 754 PPXPXXRPPXLXX--AXXPPPXSRXXSXXXXXGSPPS-XXGGXSXPPQP 891
PP P PP L A PPP S PP+ GG PP P
Sbjct: 599 PPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPP 647
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = +2
Query: 755 PPPPTXXPP---PS-XPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXPPNR 892
PPPP PP PS P + R P P+ PP G PP R
Sbjct: 79 PPPPQPTPPAPRPSYGPPQTQPPRPPPQPTPSAPAPPPPSYGPPQTPPPR 128
Score = 29.5 bits (63), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPP 856
PPPP+ PP + P R + P P + PP
Sbjct: 114 PPPPSYGPPQTPPPRPPPQPTPSAPAPPPSYGPP 147
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = +2
Query: 755 PPPPTXXPP---PS-XPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXPPNR 892
PPPP PP PS P + R P P+ PP G PP R
Sbjct: 79 PPPPQPTPPAPRPSYGPPQTQPPRPPPQPTPSAPAPPPPSYGPPQTPPPR 128
Score = 29.5 bits (63), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPP 856
PPPP+ PP + P R + P P + PP
Sbjct: 114 PPPPSYGPPQTPPPRPPPQPTPSAPAPPPSYGPP 147
>AY089686-1|AAL90424.1| 95|Drosophila melanogaster RH62702p
protein.
Length = 95
Score = 29.1 bits (62), Expect = 8.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 128 GRSGCRSSIRTRLETRNSCIPRGSEEGWRWTR 223
G + CR + R++ C+P+G + GW W R
Sbjct: 18 GVARCRGCKQKRIKNLTLCVPKGVDAGW-WGR 48
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,031,926
Number of Sequences: 53049
Number of extensions: 702137
Number of successful extensions: 4252
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3820
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -