Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_F20
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93382-6|CAB07617.1| 136|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.16
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.49
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.49
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.49
Z92829-5|CAB07345.1| 324|Caenorhabditis elegans Hypothetical pr... 31 1.5
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 29 3.4
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z93382-6|CAB07617.1| 136|Caenorhabditis elegans Hypothetical
protein F45G2.8 protein.
Length = 136
Score = 64.5 bits (150), Expect = 1e-10
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +2
Query: 275 EAMQILNIEK-VDPEKISKNYEHLFAVNDKSKGGSFYLQSKIVXAXXRLDAELKQTSPNS 451
E++QILN++ ++ E++ K+YEHLF +NDKSKGG+ YLQSK+ A R+D E +
Sbjct: 66 ESLQILNVKTPLNREEVEKHYEHLFNINDKSKGGTLYLQSKVFRAKERIDEEFGRIELKE 125
Query: 452 EQ 457
E+
Sbjct: 126 EK 127
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQP 891
PP P PP PPP + GSPP G S PP P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG-SPPPPP 284
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXPPNR 892
PPP PPP P R + P A PP G PP +
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 335
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQP 891
PP PP PPP + GSPP G PP P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 775 PPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPP 885
PP A PPP GSPP G S PP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQPXXS 900
PP PP + PPP PP G PP P S
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQP 891
PP P PP PPP + GSPP G S PP P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG-SPPPPP 305
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXPPNR 892
PPP PPP P R + P A PP G PP +
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 356
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQP 891
PP PP PPP + GSPP G PP P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 775 PPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPP 885
PP A PPP GSPP G S PP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQPXXS 900
PP PP + PPP PP G PP P S
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQP 891
PP P PP PPP + GSPP G S PP P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG-SPPPPP 290
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXPPNR 892
PPP PPP P R + P A PP G PP +
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 341
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQP 891
PP PP PPP + GSPP G PP P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 775 PPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPP 885
PP A PPP GSPP G S PP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQPXXS 900
PP PP + PPP PP G PP P S
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQP 891
PP P PP PPP PP GG PP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXPP 886
PP PPP P P P G PP+ G PP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQP 891
PP P PP PPP P GG PP P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQP 891
PP P PP PPP PP GG PP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXPP 886
PP PPP P P P G PP+ G PP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQP 891
PP P PP PPP P GG PP P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQP 891
PP P PP PPP PP GG PP P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 755 PPPPTXXPPPSXPXRXHXRRRAXXPXPAXAGHPPLXXGVXXXPP 886
PP PPP P P P G PP+ G PP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 754 PPXPXXRPPXLXXAXXPPPXSRXXSXXXXXGSPPSXXGGXSXPPQP 891
PP P PP PPP P GG PP P
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>Z92829-5|CAB07345.1| 324|Caenorhabditis elegans Hypothetical
protein F10A3.5 protein.
Length = 324
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -1
Query: 194 LLGCSYFLFQGACE--CSTYNLSAQNYYLSYVFSHVSLSTVLYKF 66
LLG SYF Q A CSTY + + + + ++S+++ LY+F
Sbjct: 83 LLGYSYFTGQLALATLCSTYGMMITMLAMHFYYRYLSVTSSLYRF 127
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 106 YLAMFHYQPSYTSFCHYEIQILRIPYSXM-VGEYA 5
YL H+ P Y ++I IL IPY + EYA
Sbjct: 100 YLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYA 134
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = -1
Query: 890 GWGGXXXPPXKEGGDPXXXXXXXXRDXGGGXXAXXRXGGRXXGXGG 753
G+GG GG R GGG + R GG G GG
Sbjct: 5 GYGGSRSYGGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGG 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,818,957
Number of Sequences: 27780
Number of extensions: 333903
Number of successful extensions: 1559
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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