Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_F19
         (842 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0479 + 14529783-14530613                                         33   0.38 
07_03_1629 - 28246440-28247339                                         29   4.6  
10_08_0206 + 15809261-15809390,15810655-15810763,15811237-158112...    29   6.1  
04_03_0960 - 21257219-21257953                                         29   6.1  
12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626...    28   8.1  
02_04_0025 - 19006493-19007040,19007665-19007899                       28   8.1  

>05_03_0479 + 14529783-14530613
          Length = 276

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -1

Query: 242 MACPRRACHLRRRSWGRMCKRHRTPPCLRRTWL 144
           MA  RR   +RRR WGR     R P   +R WL
Sbjct: 87  MAASRRFRGVRRRPWGRFSAEIRDPSLQKRLWL 119


>07_03_1629 - 28246440-28247339
          Length = 299

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 233 PRRACHLRRRSWGRMCKRHRTPPCLRRTWL 144
           P R   +RRR WGR     R P    R WL
Sbjct: 36  PGRFLGVRRRPWGRYAAEIRDPTTKERHWL 65


>10_08_0206 +
           15809261-15809390,15810655-15810763,15811237-15811265,
           15811721-15813048
          Length = 531

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 248 GSMACPRRACHLRRRSWGRMCKRH 177
           G   C R   H+R   W R CK+H
Sbjct: 140 GPYHCRREGLHVRSNQWKRDCKKH 163


>04_03_0960 - 21257219-21257953
          Length = 244

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -1

Query: 257 AXPGSMACPRRACHLRRRSWGRMCKRHRTPPCLRRTWL 144
           A  G++   R+   +RRR WG+     R P    R WL
Sbjct: 52  ARQGAVPAARKYRGVRRRPWGKWAAEIRDPHRAARVWL 89


>12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653,
            24963146-24963943,24964140-24964422,24964500-24964951,
            24965744-24965870,24965950-24966074,24966188-24966858,
            24966976-24967093,24967177-24967293,24967564-24967658,
            24968152-24968303,24968858-24968913,24969001-24969218,
            24969842-24970239,24970345-24970628,24970730-24970836,
            24970882-24970968,24971729-24971990,24972228-24972503,
            24973197-24973254,24973437-24973756,24973889-24973999,
            24974183-24974350,24974494-24974622,24974731-24974820,
            24974934-24975040,24975133-24975281,24975584-24975666,
            24975749-24975844,24975957-24976079,24976180-24976263,
            24976371-24976511,24976652-24976951,24977386-24977453,
            24977540-24977642,24979363-24979524,24979613-24981230,
            24981270-24981661,24981689-24981991,24982078-24982161,
            24982296-24982448,24982678-24982841,24982915-24983062,
            24983209-24983331,24983409-24983496,24983686-24983867
          Length = 4177

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +1

Query: 184  LHMRPQLRLRRWQALRGQAMLPGXAKI--NLTLTLIFHF-NNEESI 312
            L++  +L +    A++  A+ P   KI  N  LTL+ HF NNE++I
Sbjct: 1659 LYVAGKLNVMGPYAVKSSAVFPNCCKIENNSRLTLVCHFQNNEDAI 1704


>02_04_0025 - 19006493-19007040,19007665-19007899
          Length = 260

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -1

Query: 248 GSMACPRRACHLRRRSWGRMCKRHRTPPCLRRTWL 144
           G+ A  R    +RRR WG+     R P    R WL
Sbjct: 79  GAAAAERHYRGVRRRPWGKWAAEIRDPNKAARVWL 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,864,457
Number of Sequences: 37544
Number of extensions: 194670
Number of successful extensions: 473
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)