Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_F18
         (920 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U07652-1|AAA20518.1|  390|Drosophila melanogaster La/SS-B protein.     29   6.8  
L32988-1|AAA21776.1|  390|Drosophila melanogaster La ribonucleop...    29   6.8  
AY075257-1|AAL68124.1|  390|Drosophila melanogaster AT22034p pro...    29   6.8  
AE014134-3230|AAN11073.1|  390|Drosophila melanogaster CG10922-P...    29   6.8  
AE014134-3229|AAF53885.1|  390|Drosophila melanogaster CG10922-P...    29   6.8  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   9.0  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   9.0  

>U07652-1|AAA20518.1|  390|Drosophila melanogaster La/SS-B protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 765 MRKRHASRREKGGQVSRKRQGRNRRAHEGASR 670
           M+KR    R KG + +RKR G N   H G  +
Sbjct: 355 MKKRRDFTRNKGKRFNRKRHGGNDHKHGGGKK 386


>L32988-1|AAA21776.1|  390|Drosophila melanogaster La
           ribonucleoprotein protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 765 MRKRHASRREKGGQVSRKRQGRNRRAHEGASR 670
           M+KR    R KG + +RKR G N   H G  +
Sbjct: 355 MKKRRDFTRNKGKRFNRKRHGGNDHKHGGGKK 386


>AY075257-1|AAL68124.1|  390|Drosophila melanogaster AT22034p
           protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 765 MRKRHASRREKGGQVSRKRQGRNRRAHEGASR 670
           M+KR    R KG + +RKR G N   H G  +
Sbjct: 355 MKKRRDFTRNKGKRFNRKRHGGNDHKHGGGKK 386


>AE014134-3230|AAN11073.1|  390|Drosophila melanogaster CG10922-PB,
           isoform B protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 765 MRKRHASRREKGGQVSRKRQGRNRRAHEGASR 670
           M+KR    R KG + +RKR G N   H G  +
Sbjct: 355 MKKRRDFTRNKGKRFNRKRHGGNDHKHGGGKK 386


>AE014134-3229|AAF53885.1|  390|Drosophila melanogaster CG10922-PA,
           isoform A protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 765 MRKRHASRREKGGQVSRKRQGRNRRAHEGASR 670
           M+KR    R KG + +RKR G N   H G  +
Sbjct: 355 MKKRRDFTRNKGKRFNRKRHGGNDHKHGGGKK 386


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 344 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 439
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 344 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 439
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,454,396
Number of Sequences: 53049
Number of extensions: 740446
Number of successful extensions: 1833
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1833
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)