Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_F17
(904 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2BBJ9 Cluster: Putative uncharacterized protein; n=1; ... 35 3.3
UniRef50_O97216 Cluster: Putative uncharacterized protein L4830.... 35 3.3
UniRef50_A6EP00 Cluster: DNA topoisomerase IV subunit B; n=1; un... 34 5.7
UniRef50_A5Z7I1 Cluster: Putative uncharacterized protein; n=2; ... 34 5.7
UniRef50_Q1HP71 Cluster: Cnox-1; n=3; Anthomedusae|Rep: Cnox-1 -... 34 5.7
UniRef50_UPI00005637E6 Cluster: hypothetical protein GLP_585_166... 33 10.0
UniRef50_A1ZEF6 Cluster: Lipoprotein, putative; n=1; Microscilla... 33 10.0
UniRef50_Q2LYV3 Cluster: GA20646-PA; n=1; Drosophila pseudoobscu... 33 10.0
>UniRef50_Q2BBJ9 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. NRRL B-14911|Rep: Putative uncharacterized
protein - Bacillus sp. NRRL B-14911
Length = 192
Score = 34.7 bits (76), Expect = 3.3
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 325 DPDNKTFLPIGSKEIGTVYPKNIFTKVVKINKINSPREQLAEFRKDHYFDRFRGD 489
D K L GS+ I + YP F KV I + + + L+ F++DH+ DR+ G+
Sbjct: 17 DSIEKGHLNSGSELIKSYYP---FQKVEYIKRTYTKADMLSIFQRDHFIDRYSGE 68
>UniRef50_O97216 Cluster: Putative uncharacterized protein L4830.12;
n=2; Leishmania|Rep: Putative uncharacterized protein
L4830.12 - Leishmania major
Length = 716
Score = 34.7 bits (76), Expect = 3.3
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -2
Query: 591 DAPGQGPRTKGFFDSSLSLVRLLRGYRNGESTFKISS 481
D G+G T FDS+ SLVRL R Y+ ST +SS
Sbjct: 344 DGDGRGDGTTACFDSAASLVRLQRAYQPLSSTATVSS 380
>UniRef50_A6EP00 Cluster: DNA topoisomerase IV subunit B; n=1;
unidentified eubacterium SCB49|Rep: DNA topoisomerase IV
subunit B - unidentified eubacterium SCB49
Length = 47
Score = 33.9 bits (74), Expect = 5.7
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 200 LXVFQDV*DHTVTNGLVTCPKVLLINCVKGRSTSIQILNFIGTLIIK 340
+ VF D ++T V C V +++ VK S+S+++LN IG IIK
Sbjct: 1 MNVFIDTLQFSITTKEVACFNVKILSEVKHNSSSVEVLNNIGYNIIK 47
>UniRef50_A5Z7I1 Cluster: Putative uncharacterized protein; n=2;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 205
Score = 33.9 bits (74), Expect = 5.7
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 475 RFRGDFESTFSVPVSPQKP-NQAETTVEKPLSSWPLAR-CVGFFGPEFYSCTSDCPNFYN 648
R + S+F+ +S QKP + TT E+P + +R C+ GP T DCP N
Sbjct: 142 RITSNLMSSFTSTLSEQKPITKNSTTSEEPTPTKIGSRFCITPHGPPLLKLTGDCPKRAN 201
Query: 649 CSE 657
S+
Sbjct: 202 TSD 204
>UniRef50_Q1HP71 Cluster: Cnox-1; n=3; Anthomedusae|Rep: Cnox-1 -
Eleutheria dichotoma
Length = 308
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 183 NLTIIFTPTAVVIRERTMKVLSNVDSMLDTQSFKSSTHNNTTKTDKIL 40
N F PT + + V+ N+D+ DT SF S +H N + T L
Sbjct: 39 NFRSAFLPTTLSSHQYQSSVIRNIDNSTDTTSFGSFSHGNESSTHNSL 86
>UniRef50_UPI00005637E6 Cluster: hypothetical protein
GLP_585_16625_8196; n=1; Giardia lamblia ATCC 50803|Rep:
hypothetical protein GLP_585_16625_8196 - Giardia lamblia
ATCC 50803
Length = 2809
Score = 33.1 bits (72), Expect = 10.0
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = -1
Query: 241 VCNGMVSYVLEYX--QGIETK*FNNYLHANGSGNKRKNDESSIKCGFNVRHAVFQIFNT* 68
+CNG+++++ +Y G E+ +YL NGS N ND ++++ + + +F +
Sbjct: 1127 LCNGILTHLSQYSFLNGNESSSTQDYLLYNGSSNAITNDVNALENDSFYKSQLINLFPSE 1186
Query: 67 *HNKNXQNLKEF 32
+N+N ++ F
Sbjct: 1187 LYNENSDDITIF 1198
>UniRef50_A1ZEF6 Cluster: Lipoprotein, putative; n=1; Microscilla
marina ATCC 23134|Rep: Lipoprotein, putative -
Microscilla marina ATCC 23134
Length = 407
Score = 33.1 bits (72), Expect = 10.0
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +1
Query: 217 RMRPYRYKRFSDVPEGIINKLRQRAFHKY--PDL--EFYWDPDNKTFLPIGSKEIGTVYP 384
++RP+R K G INK + F+ + PD F + P+ ++ G + IG +
Sbjct: 113 KIRPWRDKEI-----GHINKEKHNLFYPFSGPDFLNAFLYFPNCDNYIMFGLEPIGELPK 167
Query: 385 KNIFTKVVKINKINSPREQLAEFRKDHYF 471
+I K N + RE LAE K +YF
Sbjct: 168 FDIKDKKFLKNYLYRSREALAELLKRNYF 196
>UniRef50_Q2LYV3 Cluster: GA20646-PA; n=1; Drosophila
pseudoobscura|Rep: GA20646-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 986
Score = 33.1 bits (72), Expect = 10.0
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 382 PKNIFTKVVKINKINSPREQLAEFRKDHYFDRFRGDFESTFS-VPVSPQKPN 534
PK +F+K + + + R L+E+ KD RFR F+ + VP+ K N
Sbjct: 211 PKEVFSKRIDLEEYYKQRGFLSEYIKDFRLRRFRHQFDQSLPLVPLEQYKAN 262
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,999,688
Number of Sequences: 1657284
Number of extensions: 13164492
Number of successful extensions: 34608
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34601
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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