Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_F15
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99709-12|CAI79146.1| 349|Caenorhabditis elegans Hypothetical p... 175 3e-44
Z99709-11|CAB16861.1| 347|Caenorhabditis elegans Hypothetical p... 175 3e-44
U00056-2|AAN65309.2| 187|Caenorhabditis elegans Hypothetical pr... 31 0.83
U00055-3|AAA50723.3| 693|Caenorhabditis elegans Hypothetical pr... 31 0.83
U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (dro... 29 3.3
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr... 29 4.4
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 29 5.8
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 29 5.8
Z67755-5|CAA91758.2| 966|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein. 28 7.7
AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z99709-12|CAI79146.1| 349|Caenorhabditis elegans Hypothetical
protein C47B2.6b protein.
Length = 349
Score = 175 bits (426), Expect = 3e-44
Identities = 76/152 (50%), Positives = 110/152 (72%), Gaps = 1/152 (0%)
Frame = +3
Query: 267 GLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMDLASGHVAA 446
GLIGEDP NLMP+++QVA+GK PVLT++G ++T DGTG+RDYIHV+DLA GHV A
Sbjct: 196 GLIGEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTGVRDYIHVVDLAKGHVKA 255
Query: 447 LNLLSQT-HIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLGDISAMWADTS 623
+ + +I ++YNLGTG G SV+++V+ ++V+ +P+K R GD+++++ D S
Sbjct: 256 FDRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKKVSGRDIPVKIGVPRPGDVASVYCDPS 315
Query: 624 LAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 719
LA+E+LGW + +EEMC D W WQT NP G+
Sbjct: 316 LAQEKLGWRAETGLEEMCADLWNWQTKNPQGF 347
Score = 76.2 bits (179), Expect = 3e-14
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +1
Query: 64 VFSSSCTVYGEPEHLPITETHPTGS-ITNVYGRTKYFIEEMLKDLSAADDKWNIISLRXF 240
VFSSS TVYG P LPITE TG ITN YG+TKY +E++L D+ A+ +WN++ LR F
Sbjct: 128 VFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEWNVVLLRYF 187
Query: 241 QP 246
P
Sbjct: 188 NP 189
>Z99709-11|CAB16861.1| 347|Caenorhabditis elegans Hypothetical
protein C47B2.6a protein.
Length = 347
Score = 175 bits (426), Expect = 3e-44
Identities = 76/152 (50%), Positives = 110/152 (72%), Gaps = 1/152 (0%)
Frame = +3
Query: 267 GLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMDLASGHVAA 446
GLIGEDP NLMP+++QVA+GK PVLT++G ++T DGTG+RDYIHV+DLA GHV A
Sbjct: 194 GLIGEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTGVRDYIHVVDLAKGHVKA 253
Query: 447 LNLLSQT-HIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLGDISAMWADTS 623
+ + +I ++YNLGTG G SV+++V+ ++V+ +P+K R GD+++++ D S
Sbjct: 254 FDRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKKVSGRDIPVKIGVPRPGDVASVYCDPS 313
Query: 624 LAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 719
LA+E+LGW + +EEMC D W WQT NP G+
Sbjct: 314 LAQEKLGWRAETGLEEMCADLWNWQTKNPQGF 345
Score = 76.2 bits (179), Expect = 3e-14
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +1
Query: 64 VFSSSCTVYGEPEHLPITETHPTGS-ITNVYGRTKYFIEEMLKDLSAADDKWNIISLRXF 240
VFSSS TVYG P LPITE TG ITN YG+TKY +E++L D+ A+ +WN++ LR F
Sbjct: 126 VFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEWNVVLLRYF 185
Query: 241 QP 246
P
Sbjct: 186 NP 187
>U00056-2|AAN65309.2| 187|Caenorhabditis elegans Hypothetical
protein R05H11.2 protein.
Length = 187
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 67 FSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKD 192
+S +V G P +T + P + N+Y R K +I E+ KD
Sbjct: 68 YSDCSSVSGSPSSSTMTSSPPPQNFFNIYDRLKEYISEVPKD 109
>U00055-3|AAA50723.3| 693|Caenorhabditis elegans Hypothetical
protein R02F2.7 protein.
Length = 693
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 501 GKGVSVKELVNVFERVTKAKVPLKYVDRRLGDISAMWADTSLAKEE 638
GKG + ++ VF++V + P+K+V+R D++ + A E
Sbjct: 409 GKGSENENILKVFKKVAQEAAPVKFVNRTAADVAEKLREPEFAVAE 454
>U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin
(drosophila neuroligin-like) homolog protein 1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 635 RTRMVHSINYRRDVYGFLAMADNESRRIPEKDQ 733
R +V ++NYR +GF++M D+E+ +DQ
Sbjct: 217 RGMVVVTVNYRLGAFGFMSMGDSETGNYGLQDQ 249
>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical protein
F10F2.2 protein.
Length = 1343
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 15 RFXYREFLKIYNLLSNGVLVVMYSLRRT*TFADHGN 122
RF YR NL +NG + + + R T ADHG+
Sbjct: 1232 RFTYRNLQNFQNLKTNGQVCIRFCDDRGMTGADHGS 1267
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +3
Query: 549 TKAKVPLKYVDRRLGDISAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGYRKK 728
+K +PLK V+ R +I A T L KE T+L +D + PDG
Sbjct: 93 SKTLIPLKDVEARK-EIEGKIAFTDLKKEVTQNWTELVQSNRVSDQLIFPLTKPDGIMWG 151
Query: 729 TKKTEIVVNGK 761
+KTE V+ K
Sbjct: 152 DEKTEPVLTEK 162
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 470 YQTKGLQSGYRQRSFSQRISERIRKSHKSQSATQVRRSKTWRHQ 601
++T GL Y+ Q ++ R+R+S + Q+ RSK R Q
Sbjct: 59 HRTDGLWDEYKNFQNLQGVTGRLRRSTNKRHTGQMNRSKKMRRQ 102
>Z67755-5|CAA91758.2| 966|Caenorhabditis elegans Hypothetical
protein F54F7.5 protein.
Length = 966
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -1
Query: 317 EWHEVGELLSRVFADQALKDV 255
+WH + ++L++ F D +LK V
Sbjct: 217 KWHNINQILTKTFVDMSLKSV 237
>AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein.
Length = 966
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -1
Query: 317 EWHEVGELLSRVFADQALKDV 255
+WH + ++L++ F D +LK V
Sbjct: 217 KWHNINQILTKTFVDMSLKSV 237
>AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical
protein K06A5.4 protein.
Length = 877
Score = 28.3 bits (60), Expect = 7.7
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 9/159 (5%)
Frame = +2
Query: 296 VHQPHAIPR-ASCSREETCAHRFRNRL*H--SRWNRYSRLHTRHGFG*RACSRVKFTQPN 466
V P PR S SR+ R+ R H SRW+R++ + RH R + + +
Sbjct: 353 VSSPSPEPRHRSSSRDGYEQSRYSQRYEHDNSRWSRHNATYRRHEDESRMSRKRSIVRDD 412
Query: 467 PYQTKGLQSGYRQRSF----SQRISERIR-KSHKSQSATQVRRSKTWRHQRHVGGHLTG* 631
++ G R+R + Q S+R R + S S VR + H+RH G
Sbjct: 413 FEYSRRHDDGARRRDYYDADIQGDSKRYRGRDASSSSGRSVRFEE--EHRRH-GDEYRDP 469
Query: 632 RRTRMVHSINYRRDVYGFLAMADNES-RRIPEKDQENRD 745
R R + RR+ + D E I +++E R+
Sbjct: 470 RGPRDYNDYGRRRNHANSRSGEDEEKLNAIVRREKELRN 508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,663,566
Number of Sequences: 27780
Number of extensions: 431812
Number of successful extensions: 1293
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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