Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_F14
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.6  
12_02_0692 - 22197582-22198214,22198761-22198935,22199089-221991...    29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  
06_03_0218 + 18219956-18220555                                         28   8.6  
03_04_0061 - 16949038-16950006                                         28   8.6  
01_06_0389 - 28932228-28932365,28932967-28934184                       28   8.6  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +3

Query: 528 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 686
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>12_02_0692 -
           22197582-22198214,22198761-22198935,22199089-22199185,
           22199359-22199473,22199546-22199633,22199972-22200063,
           22200138-22200629,22201025-22201048,22201348-22203489
          Length = 1285

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/84 (26%), Positives = 39/84 (46%)
 Frame = +1

Query: 568 SQKSTLKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGALSHSSRC 747
           S K   ++   K  +  + P  +P  LPRAL+    AA R+P+   P  +R  +  ++  
Sbjct: 164 SGKGNHRNRKRKSHQQRQSPAAAPSLLPRALALLADAAGRLPLGEHPDARRSLVDTAAE- 222

Query: 748 RYLSSV*VVRSKLGCVHEPPVQPD 819
             L++  V+ + LG  +     PD
Sbjct: 223 --LAAFDVLVAVLGSGYYAEAMPD 244


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 308 NESAN---ARGEAVCVLGALPLPRSLTRCAR 391
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -3

Query: 715 SRREKGGQVSG--KRQGRNRRAHEGASRGKRLVS 620
           +RRE+  + +G  KR+GR R    G  RGKR  S
Sbjct: 106 ARRERRLEAAGAEKREGRRRGGSSGGLRGKRRAS 139


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 610 RTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 726
           RT+K PG+   ++PRA+  + P  Y   VR +   +R A
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSA 293


>01_06_0389 - 28932228-28932365,28932967-28934184
          Length = 451

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -3

Query: 781 WSERPTPN*DTYSVSYEXXRHASRREKGGQVSGKRQGRNRRAHEGASRGK 632
           W+E   P  + ++V+ +   H  R E     S  RQG     H G+ + +
Sbjct: 345 WAELSDPEMEQFAVAADGVNHVPRNEAEAIESSIRQGSYLHVHLGSGKNE 394


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,008,297
Number of Sequences: 37544
Number of extensions: 533585
Number of successful extensions: 1646
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)