Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_F10
(889 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 119 9e-26
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 101 3e-20
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 89 1e-16
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 51 5e-05
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.048
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.085
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 38 0.26
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 36 1.8
UniRef50_Q0URY7 Cluster: Putative uncharacterized protein; n=1; ... 35 3.2
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.6
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.6
UniRef50_Q1DSC2 Cluster: Predicted protein; n=1; Coccidioides im... 33 7.4
UniRef50_A7IKI2 Cluster: Histidine kinase; n=1; Xanthobacter aut... 33 9.7
UniRef50_A6LZB2 Cluster: FMN-binding domain protein precursor; n... 33 9.7
UniRef50_Q5W6I5 Cluster: Putative uncharacterized protein OSJNBb... 33 9.7
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 119 bits (287), Expect = 9e-26
Identities = 74/131 (56%), Positives = 81/131 (61%)
Frame = +1
Query: 319 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 498
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 499 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALSCFRPXPL 678
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCAL F P
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCAL-LFLPF-- 130
Query: 679 TGIPVRLSPFG 711
G+PV +G
Sbjct: 131 -GLPVSFRCYG 140
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 101 bits (241), Expect = 3e-20
Identities = 62/111 (55%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = +1
Query: 487 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALSCFR 666
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL FR
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL-LFR 60
Query: 667 PXPLTGIPVRLSPFGESVALSHSSRCXVS-QFXCRSVRSNXXCVHEPPVQP 816
P L P PF A V CRS + PP P
Sbjct: 61 PCRL---PDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
Score = 59.7 bits (138), Expect = 1e-07
Identities = 32/55 (58%), Positives = 34/55 (61%)
Frame = +2
Query: 668 PXRLPEYLSAFLPSGKAWRFLIAHAVXYPSSGVGPFAPMXXVCTNPPFSPTAXPY 832
P RLP+ F +AWRFLIAHAV S FAP VCTNPPFSPTA PY
Sbjct: 61 PCRLPDTCPPF-SLREAWRFLIAHAVGI-SVRCRSFAPSWAVCTNPPFSPTAAPY 113
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 89.0 bits (211), Expect = 1e-16
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +1
Query: 505 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL 654
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCAL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCAL 93
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 495 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 382
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 295 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 462
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 52.0 bits (119), Expect = 2e-05
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +1
Query: 394 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 567
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 568 IDAQVRGGETRQDYKDTRRFPLEAPSCAL 654
I Q + +T+ +YK T FPL++PS +L
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSL 110
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 50.8 bits (116), Expect = 5e-05
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = -1
Query: 823 SGRAERGVRAHXXHWSERTYTXTGIPYSVSYEKAPRFPRREKGGQV 686
S RAERGVRA+ WSER SVSYEKAPRFP+ +K QV
Sbjct: 21 SSRAERGVRAYSPAWSERPKPSRDTS-SVSYEKAPRFPKGKKAEQV 65
Score = 38.7 bits (86), Expect = 0.20
Identities = 33/95 (34%), Positives = 40/95 (42%)
Frame = -3
Query: 863 PGWTQDDS*XNKAQRSG*TGGSCTQXXLERTDLHXNWDTXQREL*ESATLSPKGERRTGI 684
PGWTQDDS K + S G + DT E A PKG++ +
Sbjct: 8 PGWTQDDS-YRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSY-EKAPRFPKGKKAEQV 65
Query: 683 PVSGQGRKQESAHEGASRGKRLVSL*SCRVSPPLT 579
QGR + AHEGA+ K SL PPLT
Sbjct: 66 SGKRQGRNRR-AHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 45.2 bits (102), Expect = 0.002
Identities = 33/79 (41%), Positives = 37/79 (46%)
Frame = +1
Query: 580 VRGGETRQDYKDTRRFPLEAPSCALSCFRPXPLTGIPVRLSPFGESVALSHSSRCXVSQF 759
VR GETRQD K P ALSC P ++ IPV SVALSHSS +S
Sbjct: 23 VRSGETRQDLKIITVSDESLP-LALSCSNPA-VSRIPVPPFSLAGSVALSHSSHSGISA- 79
Query: 760 XCRSVRSNXXCVHEPPVQP 816
CRS + PP P
Sbjct: 80 RCRSFAPSWAVSKNPPFSP 98
Score = 34.7 bits (76), Expect = 3.2
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +2
Query: 773 FAPMXXVCTNPPFSPTAXPYXXNYRL 850
FAP V NPPFSPTA PY L
Sbjct: 84 FAPSWAVSKNPPFSPTAAPYPVTVHL 109
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 414 HSKAVIRLSTESGDNAGKNM 473
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.048
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 293 SALMNRPTRGERRFAYW 343
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.085
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 365 ERGSGRAPNTQTASPRALADSLMQ 294
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 38.3 bits (85), Expect = 0.26
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = -1
Query: 832 IRXSGRAERGVRAHXXHWSER 770
IR SGRAERGVRAH WSER
Sbjct: 18 IRRSGRAERGVRAHSPAWSER 38
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 35.5 bits (78), Expect = 1.8
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 107 MIRYIDEFGQTTTRM 151
MIRYIDEFGQTTTRM
Sbjct: 349 MIRYIDEFGQTTTRM 363
>UniRef50_Q0URY7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 558
Score = 34.7 bits (76), Expect = 3.2
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = -3
Query: 713 SPKGERRTGIPVSGQGRKQESAHEGASRGKRLVSL*SCRVSPPLT*ASI---FVMLVRG- 546
S G T I VS GR +E+ + K+L+ + CR+S PLT + LV+
Sbjct: 71 SRAGAEETDIQVSKNGRDEEATWQNLPHKKQLLLIALCRLSAPLTNTCLIPYLFFLVKSM 130
Query: 545 -AEPMEKRQQRGLFTVPGLLLA 483
+EP + + + + GLL+A
Sbjct: 131 ISEPEQPTAPQRISRLTGLLVA 152
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.6
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 504 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 382
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 176 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 343
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_Q1DSC2 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 105
Score = 33.5 bits (73), Expect = 7.4
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -2
Query: 699 KADRYSGKRXGSETGERARGSFQGETPG--IFIVLSGFATSDLSVDFCDARQGGGAYG 532
+AD+ +GKR G E ER RG+ + + G + G S SV + QGGG G
Sbjct: 33 RADKDTGKRGGEEKRERERGTREPQDLGGEVSSTGDGGCNSRFSVSHQNPAQGGGRAG 90
>UniRef50_A7IKI2 Cluster: Histidine kinase; n=1; Xanthobacter
autotrophicus Py2|Rep: Histidine kinase - Xanthobacter
sp. (strain Py2)
Length = 837
Score = 33.1 bits (72), Expect = 9.7
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -3
Query: 695 RTGIPVSGQGRKQESAHEGASRGKRLVSL*SCRVSP 588
RTG+P +GR+Q SAH G R SL SC V P
Sbjct: 6 RTGVPRQRRGREQGSAHRAV--GLRRFSLPSCSVRP 39
>UniRef50_A6LZB2 Cluster: FMN-binding domain protein precursor; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: FMN-binding
domain protein precursor - Clostridium beijerinckii
NCIMB 8052
Length = 364
Score = 33.1 bits (72), Expect = 9.7
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 140 TTRMXRKKCFICEICD-AIALFVTIISCNKQVNNNNCIH 253
T + C C+ CD A + + I +CNK VN+ NCI+
Sbjct: 167 TIKRDANSCINCKRCDKACDMNIKISTCNKTVNSLNCIN 205
>UniRef50_Q5W6I5 Cluster: Putative uncharacterized protein
OSJNBb0115F21.9; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBb0115F21.9 - Oryza sativa subsp. japonica (Rice)
Length = 449
Score = 33.1 bits (72), Expect = 9.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 110 SCLDPINPXLKGDPRPXVPTI*ILRIPY 27
SC + P LKGDPRP PT+ + R P+
Sbjct: 281 SCASHLQPRLKGDPRPS-PTVVLSRFPF 307
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,933,348
Number of Sequences: 1657284
Number of extensions: 15838606
Number of successful extensions: 41603
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 39822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41570
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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