Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_F10
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023273-1|AAY55689.1|  123|Drosophila melanogaster IP02613p pro...    31   1.6  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.6  
BT010111-1|AAQ22580.1|  583|Drosophila melanogaster GH03827p pro...    29   8.6  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.6  
AE013599-3571|AAF46980.1|  898|Drosophila melanogaster CG9861-PA...    29   8.6  

>BT023273-1|AAY55689.1|  123|Drosophila melanogaster IP02613p
           protein.
          Length = 123

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +2

Query: 560 SQKSTLKSEVAKPDRTIKIPGVSPWKLPRARSPVSDPXRLPEYLSAFLPSGKAWR 724
           S +  L+S +  P R ++ PG   W   R      +P   PE L  +   G+AWR
Sbjct: 11  SWQQRLRS-LPSPSRCVRTPGSRSWWGDRRAGRSGEPPSRPEELQRWERPGRAWR 64


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 304 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 399
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>BT010111-1|AAQ22580.1|  583|Drosophila melanogaster GH03827p
           protein.
          Length = 583

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 566 KSTLKSEVAKPD-RTIKIPGVSPWKLPRARSPVSDPXRL 679
           K   K++V +P+    K P VSPWK P  R  VS P R+
Sbjct: 126 KKEKKAKVVEPEPENPKKPKVSPWK-PPPRKLVSGPFRI 163


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 304 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 399
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


>AE013599-3571|AAF46980.1|  898|Drosophila melanogaster CG9861-PA
           protein.
          Length = 898

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 566 KSTLKSEVAKPD-RTIKIPGVSPWKLPRARSPVSDPXRL 679
           K   K++V +P+    K P VSPWK P  R  VS P R+
Sbjct: 441 KKEKKAKVVEPEPENPKKPKVSPWK-PPPRKLVSGPFRI 478


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,777,078
Number of Sequences: 53049
Number of extensions: 744773
Number of successful extensions: 1701
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1701
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)