Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_F09
         (988 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.49 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   6.1  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.49
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = -3

Query: 668 GAWGXGXVXGXAXAXGXGGXGGGP*PGXGRXG 573
           GA G G   G     G GG  GGP PG G  G
Sbjct: 201 GAGGGGS--GGGAPGGGGGSSGGPGPGGGGGG 230


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 601 PPPXPPXPXAXAXPXTXPXP 660
           PPP PP P +   P   P P
Sbjct: 783 PPPPPPPPPSSLSPGGVPRP 802


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 11/32 (34%), Positives = 11/32 (34%)
 Frame = +1

Query: 574 PXRPXPGXGPPPXPPXPXAXAXPXTXPXPQAP 669
           P RP PG  P P    P     P     P  P
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQP 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,291
Number of Sequences: 2352
Number of extensions: 3760
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 108119037
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)