Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_F06
         (920 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    26   0.48 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   4.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   5.9  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +3

Query: 402 TKFTVLKACYEETGHSVPNSLLHTI-ETVDDLTEFYKTPVYTTTPFDALKLMDLPKNLHV 578
           TK+ +LKA ++  G S  N ++  + + V+++T+    P  T  P  A    DL   L  
Sbjct: 370 TKYPILKAIHQTLGGS-SNEIVEPVPQPVEEVTQ---KPSSTKAP--APPSRDLTTTLCT 423

Query: 579 QKDYVRFHPDTDTLF 623
           +  YVR  PD  ++F
Sbjct: 424 KAGYVR-DPDDCSIF 437


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 331 MFVGGSHDLVGRRKPLAAKDSAAA*TFLSALGYFF 227
           +F+GG+   + RR   A++   AA     ALG F+
Sbjct: 166 VFIGGTTGKLRRRSTAASRSRLAAFKRTIALGAFY 200


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +1

Query: 394 HWTQNLQFSKLVMKKQAIVCLIHFCIQLKQLMT*QNFTK 510
           H  +N ++ K+++     +CL    I +++     NFTK
Sbjct: 15  HSMKNFKYLKVLVTFAHFICLFPITINIRKNGLNYNFTK 53


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -1

Query: 176 NNTFAE-HILNLLLVSTSQFCLYFXIILKQC 87
           N TF    +LN+L V  +  CL   IIL  C
Sbjct: 246 NVTFVHLAVLNILRVGKNFVCLLSLIILCDC 276


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,853
Number of Sequences: 336
Number of extensions: 4362
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25754817
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)