Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_F06
         (920 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-1|CAA92691.1|  285|Caenorhabditis elegans Hypothetical pr...    78   8e-15
U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical p...    32   0.66 
AF077536-4|AAK31409.1|  726|Caenorhabditis elegans Hypothetical ...    32   0.66 
Z92832-6|CAB07375.2|  572|Caenorhabditis elegans Hypothetical pr...    31   0.88 
AC024880-2|AAF60914.4|  665|Caenorhabditis elegans Hypothetical ...    29   4.7  
AC024880-1|AAR12985.1|  634|Caenorhabditis elegans Hypothetical ...    29   4.7  

>Z68318-1|CAA92691.1|  285|Caenorhabditis elegans Hypothetical
           protein T21B10.1 protein.
          Length = 285

 Score = 78.2 bits (184), Expect = 8e-15
 Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 12/161 (7%)
 Frame = +3

Query: 270 ESLAARGFLRPTKSWDPPTNINETILKICATCGLNGNSEFEALD----------TKFTVL 419
           +++ ARGFL+ T+++ P  ++   +L+  ++C  +   + E +D           KF +L
Sbjct: 78  DAIRARGFLKYTQNYVPGVDVKNQVLEAASSCLRSAGVKSENVDQYKFVEGDNSVKFELL 137

Query: 420 KACYEETGHSVPNSLLHTIETVDDLTEFYKTPVYTTTPF-DALKLMDLPKNLHVQKDYVR 596
               +   H   N  L  +ETV D+ EFY+TPV   T + +  +  + PKN+ + +   R
Sbjct: 138 NRLGKSIEHWPTNGKLLHLETVADVVEFYQTPVKNVTKYTEMARDENKPKNVSIMEHAAR 197

Query: 597 FHP-DTDTLFNGVSAFPKSSTIVTGLKARKKYEGYNAKRKW 716
           FHP DT     G++AFP S   V  L+ ++    +  K++W
Sbjct: 198 FHPEDTHMYHGGITAFPGSGGEVLSLRQKRLLRQFQPKKEW 238


>U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical
           protein F26G1.1 protein.
          Length = 1021

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +3

Query: 351 ICATCGLNGNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEF 503
           +C++  L     F  LD    ++  C E+ G    NSL+H IET+ + T+F
Sbjct: 715 VCSSLSLIDFQAFTNLDQCIELIVRCREDMGLR-QNSLIHIIETLFNFTQF 764


>AF077536-4|AAK31409.1|  726|Caenorhabditis elegans Hypothetical
           protein C16A11.3 protein.
          Length = 726

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 17/74 (22%), Positives = 35/74 (47%)
 Frame = +3

Query: 183 YVVEVSRSHLSEQAQKKYPKADKKVQAAAESLAARGFLRPTKSWDPPTNINETILKICAT 362
           Y V++ +   SE  ++ + + +  +  A  ++ +   +R   SW    ++    LKI  +
Sbjct: 415 YAVKLFKEEHSEVGEQSWAR-ETAIMKAVTAINSANLIRMEDSWRINESVPNGFLKIAIS 473

Query: 363 CGLNGNSEFEALDT 404
             L G S FE +D+
Sbjct: 474 FELKGRSVFEVMDS 487


>Z92832-6|CAB07375.2|  572|Caenorhabditis elegans Hypothetical
           protein F31D4.7 protein.
          Length = 572

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 300 PTKSWDPPTNI--NETILKICATCGLNGNSEFEALDT 404
           PTKS D  TN+   ET L++C   G N N EF   ++
Sbjct: 513 PTKSPDEVTNLVEYETALRVCEQIGDNNNEEFSEAES 549


>AC024880-2|AAF60914.4|  665|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.2a protein.
          Length = 665

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +3

Query: 483 VDDLTEFYKTPVYTTT---PFDALKLMDLPKNLHVQKDYVRFHPDTDTLFNGVSAFPKSS 653
           V++  E  K+P  +T+   P  A  + D PK  +V ++Y R   D  T+ +    F K +
Sbjct: 259 VEEYEETTKSPTVSTSTSEPMAAAPITDAPKTENVSRNYTRIIWDRRTVRSSSEKFSKFA 318

Query: 654 TI 659
            I
Sbjct: 319 II 320


>AC024880-1|AAR12985.1|  634|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.2b protein.
          Length = 634

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +3

Query: 483 VDDLTEFYKTPVYTTT---PFDALKLMDLPKNLHVQKDYVRFHPDTDTLFNGVSAFPKSS 653
           V++  E  K+P  +T+   P  A  + D PK  +V ++Y R   D  T+ +    F K +
Sbjct: 209 VEEYEETTKSPTVSTSTSEPMAAAPITDAPKTENVSRNYTRIIWDRRTVRSSSEKFSKFA 268

Query: 654 TI 659
            I
Sbjct: 269 II 270


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,807,324
Number of Sequences: 27780
Number of extensions: 392922
Number of successful extensions: 935
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)