Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_F04
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.59 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.1  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   9.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.6  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +2

Query: 104 FQGKNCGESID-C*SNECDS 160
           + GK+CGE +D C +N C++
Sbjct: 91  YTGKDCGEYVDWCSTNPCEN 110


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 153 VIVLNSLDLDLK-NVKLQYNDGSNSAIIPSSVELSTTDETASIYFSESLLEGEATLYSEF 329
           V++L+ L  +L   +KL+Y+D +N   I  S E +       I     LL     L+++ 
Sbjct: 179 VVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIVSLRQIGSLSQLLSETVALFNDV 238

Query: 330 TG 335
            G
Sbjct: 239 FG 240


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 153 VIVLNSLDLDLK-NVKLQYNDGSNSAIIPSSVELSTTDETASIYFSESLLEGEATLYSEF 329
           V++L+ L  +L   +KL+Y+D +N   I  S E +       I     LL     L+++ 
Sbjct: 179 VVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIVSLRQIGSLSQLLSETVALFNDV 238

Query: 330 TG 335
            G
Sbjct: 239 FG 240


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 142 LTIDTFTAVFPLKVNFSRFGINSN 71
           +T   F  +FP+ +N  + G+N N
Sbjct: 27  VTFAHFICLFPITINIRKNGLNYN 50


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory
          receptor candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 36 DLPNNVIPKHYALELI 83
          D+PN+V+ KH  L ++
Sbjct: 47 DIPNSVVQKHLILLMV 62


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 588 LCQIV*SLYCLQSFL 544
           LCQ+  S+Y  Q+FL
Sbjct: 224 LCQVANSIYGFQNFL 238


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/13 (61%), Positives = 10/13 (76%), Gaps = 1/13 (7%)
 Frame = +2

Query: 101 YFQGKNC-GESID 136
           Y+QGKNC G  +D
Sbjct: 255 YYQGKNCVGGKVD 267


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 566 CIVCNLFLFYRHIRQSN 516
           C VCN    Y+H+ Q++
Sbjct: 137 CEVCNRSFGYKHVLQNH 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,291
Number of Sequences: 336
Number of extensions: 4183
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)