Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_F04
(873 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe... 151 1e-37
SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces p... 30 0.37
SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces p... 29 0.65
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 29 0.86
SPBC29A3.15c |rsm23||mitochondrial ribosomal protein subunit S23... 28 1.5
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 28 1.5
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 2.6
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 3.5
SPAC9.06c |||adducin|Schizosaccharomyces pombe|chr 1|||Manual 26 8.1
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 26 8.1
>SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 882
Score = 151 bits (366), Expect = 1e-37
Identities = 82/204 (40%), Positives = 115/204 (56%), Gaps = 1/204 (0%)
Frame = +3
Query: 39 LPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYNDGS 218
LP NV P HY L L P+LE FT+ GK V + ++ +N I L+ ++L + L++ GS
Sbjct: 20 LPKNVKPIHYDLSLYPDLETFTYGGKVVVTLDVLEDSNSITLHGINLRILTAALEW--GS 77
Query: 219 NSAIIPSSVELSTTDETASIYFSESL-LEGEATLYSEFTGEINDKMKGLYRSKYIAPNGE 395
+ + E+S DE + F ++ A L FT I+ M+G YRS Y+ +G
Sbjct: 78 QTVW---ASEVSYGDERIVLQFPSTVPANSVAVLTLPFTARISSGMEGFYRSSYVDSDGN 134
Query: 396 ERYAAVTQFEATDARRCFPCWDEPAIKATFDITLQVPADRVALSNMPVKQEKIADNTRII 575
+Y A TQ E T ARR FPCWDEPA+KATF I + + LSNM +E + D +
Sbjct: 135 TKYLATTQMEPTSARRAFPCWDEPALKATFTIDITAKENYTILSNMNAVEETVKDGLKTA 194
Query: 576 QFDTTPIMSTYLVAVVVGEYDYVE 647
+F T MSTYL+A +V E +YVE
Sbjct: 195 RFAETCRMSTYLLAWIVAELEYVE 218
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 679 VYTPVGKSKQGLFALEVAARVLPYY 753
VYT G S+QG FA E+ A+ L ++
Sbjct: 233 VYTTPGFSEQGKFAAELGAKTLDFF 257
>SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1033
Score = 30.3 bits (65), Expect = 0.37
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 45 NNVIPKHYALELIPNLEKFTFKGK--TAVKVSIVNPTNVIVLNSLDLDLKNVKLQYNDGS 218
NN++ H ++L+P L F GK +VK+S V + ++ L + ++ ++N S
Sbjct: 832 NNLLDYHVIVDLLPKLAHLYFSGKFPDSVKLSPVQQSVLLALGLQYKTIDTLEKEFNLPS 891
Query: 219 NSAIIPSSVELS 254
N ++ V+LS
Sbjct: 892 NQ-LLAMLVKLS 902
>SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 612
Score = 29.5 bits (63), Expect = 0.65
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 414 TQFEATDARRCFPCWDEPAIK--ATFDITLQVPADRVALSNMPVKQEKIADNTRIIQFDT 587
++ +A AR PC D P++K TF I ++P V S +P + + F+
Sbjct: 135 SECQAIHARSFIPCQDTPSVKVPCTFKIRSKLP---VIASGIPCGTANFCNGSLEYLFEQ 191
Query: 588 TPIMSTYLVAVVVGE 632
+ +YL ++ G+
Sbjct: 192 KNPIPSYLFCILSGD 206
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 29.1 bits (62), Expect = 0.86
Identities = 19/84 (22%), Positives = 36/84 (42%)
Frame = -1
Query: 399 VLLHWEQCIYCGTSLSFCHLFHL*TQNKASLRLLVKILRNKYLLFHQLYSILLTMELSLN 220
+L WE IYC C + + S ++VKIL +LL+ Y + + +
Sbjct: 163 LLKAWE--IYCLAEAQTCIFSKANSNDTTSESIIVKILAKVFLLYEDAYKLFKNATGAPS 220
Query: 219 *SHRYTEVSHFSNPSLSYSILSHS 148
+T + +++Y I+S +
Sbjct: 221 IFVHWTYIQKLFYQTITYQIISRT 244
>SPBC29A3.15c |rsm23||mitochondrial ribosomal protein subunit
S23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 237 SSVELSTTDETASIYFSESLLEGEATLYSEFTGEINDKMKGLYRSK 374
SSVE STT +S+ L EGE TL EI+ M +S+
Sbjct: 90 SSVEKSTTIPNSSVVLDHLLNEGENTLEEVKPSEIHPHMSWSSKSE 135
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 28.3 bits (60), Expect = 1.5
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = -1
Query: 375 IYCGTSLSFCHLFHL*TQNKASLRLLVKILRNKYLLFHQLYSILLTMELSLN*SHRYTEV 196
IYCGTS+ H F L ++ +LL++ + K + + +Y +T SH V
Sbjct: 623 IYCGTSMFHSHKFILCARSSFLRKLLLQ--KKKSSVSNIIYIEEITQ------SHSTIRV 674
Query: 195 SHFSNPSLSYSILSHSLD*QSILSP 121
P L+ +IL H L ++LSP
Sbjct: 675 EDI--PPLAVAILLHYLYTDTLLSP 697
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 186 KNVKLQYNDGSNSAIIPSSVELSTTDETASIYFSESLLEGEATLYS 323
+N L D + ++ ++ +S TD AS S SLL LYS
Sbjct: 47 RNGLLSLLDSNTTSASVQTIAISQTDNAASCIPSASLLSSSVVLYS 92
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 593 WCCVKLYDPCIVCNLFLFYRH 531
+CC+ ++ CIVC L L H
Sbjct: 1267 FCCLSIHGLCIVCGLCLHVMH 1287
>SPAC9.06c |||adducin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 25.8 bits (54), Expect = 8.1
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Frame = +3
Query: 54 IPKHYALELIPN---LEKFTFKGKTAVKVSIVNPTNVIVLNSL-DLDLKNVKLQYNDGSN 221
+ K+ LELIP+ L F A+ V + I N + +L N + D N
Sbjct: 5 LEKNLILELIPHFYSLGWMKFGSGYAICVKDRVQRDFITENDIVTFNLSNQSVT-KDLVN 63
Query: 222 SAIIPSSVELSTTDETASIYFSESLLEGEATLYSE-FTGEINDKMKGL 362
A I S V LS D A IY S S+ A++Y+E FT + + +KG+
Sbjct: 64 WAYIFSWV-LSNMDAVACIY-STSVAAVGASMYNEKFTTQSKEMIKGI 109
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 25.8 bits (54), Expect = 8.1
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 60 KHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLD--LDLKNVKLQYNDGS-NSAI 230
+HY LEL +L G+T + S ++VIV LD +DL + Q++D S NS
Sbjct: 1522 EHYYLELKESLPGVLQNGQTDLDPSKEQMSSVIVSFLLDELMDLTETR-QFSDRSPNSEF 1580
Query: 231 IPSSVEL 251
P + L
Sbjct: 1581 TPENDSL 1587
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,318,125
Number of Sequences: 5004
Number of extensions: 69086
Number of successful extensions: 198
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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