Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_F03
(909 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.21
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.21
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.21
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.28
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.28
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.28
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.28
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.28
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 33 0.37
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 33 0.37
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.49
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 32 0.65
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 0.86
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 30 2.0
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 2.0
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.6
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 3.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.6
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 28 8.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.21
Identities = 25/82 (30%), Positives = 25/82 (30%), Gaps = 5/82 (6%)
Frame = +3
Query: 582 GGPPXXALRPPXQXXXXXXXXXXXXXXXTPGTXKPAXXPQPGQKRRTPXGPXRXPXPP-- 755
GGPP PP T G P P PG GP P PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP---PPPGGLPPISGGPPPPPPPPGG 767
Query: 756 ---KPXXKPXXDFXGNXPRPPP 812
P P F G P PPP
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.21
Identities = 25/82 (30%), Positives = 25/82 (30%), Gaps = 5/82 (6%)
Frame = +3
Query: 582 GGPPXXALRPPXQXXXXXXXXXXXXXXXTPGTXKPAXXPQPGQKRRTPXGPXRXPXPP-- 755
GGPP PP T G P P PG GP P PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP---PPPGGLPPISGGPPPPPPPPGG 767
Query: 756 ---KPXXKPXXDFXGNXPRPPP 812
P P F G P PPP
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.21
Identities = 25/82 (30%), Positives = 25/82 (30%), Gaps = 5/82 (6%)
Frame = +3
Query: 582 GGPPXXALRPPXQXXXXXXXXXXXXXXXTPGTXKPAXXPQPGQKRRTPXGPXRXPXPP-- 755
GGPP PP T G P P PG GP P PP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP---PPPGGLPPISGGPPPPPPPPGG 350
Query: 756 ---KPXXKPXXDFXGNXPRPPP 812
P P F G P PPP
Sbjct: 351 CPPPPPPPPPGGFKGGPPPPPP 372
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +2
Query: 722 PGWAXKXPXPPKTXXKTPXXLXXKXXPPPPKKXPXXXPPXXPPXAXXXXXXXXXXGXPGX 901
PG P PP + P PPP + P PP PP P
Sbjct: 311 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 370
Query: 902 PP 907
PP
Sbjct: 371 PP 372
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +3
Query: 669 PGTXKPAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPP 812
PG P P P R GP P PP G P PPP
Sbjct: 339 PGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 716 PNPGWAXKXPXPPKTXXKTPXXLXXKXXPPPPKK--XPXXXPPXXPPXAXXXXXXXXXXG 889
P PG + P PP + P PPPP + P P PP G
Sbjct: 279 PTPGMTPRPPPPPSSGMWPP------PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 332
Query: 890 XPGXPP 907
P PP
Sbjct: 333 MPPPPP 338
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 672 GTXKPAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPP 812
G P P PG+ P P P PP P G P PPP
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG-MGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +2
Query: 722 PGWAXKXPXPPKTXXKTPXXLXXKXXPPPPKKXPXXXPPXXPPXAXXXXXXXXXXGXPGX 901
PG P PP + P PPP + P PP PP P
Sbjct: 321 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 380
Query: 902 PP 907
PP
Sbjct: 381 PP 382
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +3
Query: 669 PGTXKPAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPP 812
PG P P P R GP P PP G P PPP
Sbjct: 349 PGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 716 PNPGWAXKXPXPPKTXXKTPXXLXXKXXPPPPKK--XPXXXPPXXPPXAXXXXXXXXXXG 889
P PG + P PP + P PPPP + P P PP G
Sbjct: 289 PTPGMTPRPPPPPSSGMWPP------PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 342
Query: 890 XPGXPP 907
P PP
Sbjct: 343 MPPPPP 348
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 672 GTXKPAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPP 812
G P P PG+ P P P PP P G P PPP
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG-MGGMPPPPPP 349
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/81 (25%), Positives = 25/81 (30%)
Frame = +3
Query: 666 TPGTXKPAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPPKKXXXXXXXXX 845
+P A P P + P P P PP P G+ P PPP +
Sbjct: 254 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR----GSPPT 309
Query: 846 XXXXXXXXXXXPPPGXRGXPP 908
PPP G PP
Sbjct: 310 GSLPPPQAGGSPPPAGTGSPP 330
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = +3
Query: 696 PQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPPKKXXXXXXXXXXXXXXXXXXX 875
P P K P P PP P G+ P PPP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-PPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 876 XPPPGXRGXPP 908
PPP RG PP
Sbjct: 298 PPPPPPRGSPP 308
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/68 (26%), Positives = 22/68 (32%)
Frame = +3
Query: 705 GQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPPKKXXXXXXXXXXXXXXXXXXXXPP 884
G+++ P G P PP P P G+ P PPP PP
Sbjct: 227 GKRQAPPAGSP--PPPPPPKGSPPLAGSGSPP-PPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Query: 885 PGXRGXPP 908
P PP
Sbjct: 284 PAGGSPPP 291
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/81 (25%), Positives = 25/81 (30%)
Frame = +3
Query: 666 TPGTXKPAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPPKKXXXXXXXXX 845
+P A P P + P P P PP P G+ P PPP +
Sbjct: 275 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR----GSPPT 330
Query: 846 XXXXXXXXXXXPPPGXRGXPP 908
PPP G PP
Sbjct: 331 GSLPPPQAGGSPPPAGTGSPP 351
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = +3
Query: 696 PQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPPKKXXXXXXXXXXXXXXXXXXX 875
P P K P P PP P G+ P PPP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-PPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 876 XPPPGXRGXPP 908
PPP RG PP
Sbjct: 319 PPPPPPRGSPP 329
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/68 (26%), Positives = 22/68 (32%)
Frame = +3
Query: 705 GQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPPKKXXXXXXXXXXXXXXXXXXXXPP 884
G+++ P G P PP P P G+ P PPP PP
Sbjct: 248 GKRQAPPAGSP--PPPPPPKGSPPLAGSGSPP-PPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Query: 885 PGXRGXPP 908
P PP
Sbjct: 305 PAGGSPPP 312
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/81 (25%), Positives = 25/81 (30%)
Frame = +3
Query: 666 TPGTXKPAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPPKKXXXXXXXXX 845
+P A P P + P P P PP P G+ P PPP +
Sbjct: 260 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR----GSPPT 315
Query: 846 XXXXXXXXXXXPPPGXRGXPP 908
PPP G PP
Sbjct: 316 GSLPPPQAGGSPPPAGTGSPP 336
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = +3
Query: 696 PQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPPKKXXXXXXXXXXXXXXXXXXX 875
P P K P P PP P G+ P PPP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-PPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 876 XPPPGXRGXPP 908
PPP RG PP
Sbjct: 304 PPPPPPRGSPP 314
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/68 (26%), Positives = 22/68 (32%)
Frame = +3
Query: 705 GQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPPPKKXXXXXXXXXXXXXXXXXXXXPP 884
G+++ P G P PP P P G+ P PPP PP
Sbjct: 233 GKRQAPPAGSP--PPPPPPKGSPPLAGSGSPP-PPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Query: 885 PGXRGXPP 908
P PP
Sbjct: 290 PAGGSPPP 297
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 675 TXKPAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPP 809
T P P P P P P PPKP +P PRPP
Sbjct: 70 TESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 675 TXKPAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPP 809
T P P P P P P PPKP +P PRPP
Sbjct: 292 TESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 336
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.3 bits (70), Expect = 0.49
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 743 PXPPKTXXKTPXXLXXKXXPPPPKKXPXXXPPXXPP 850
P PP T K P + PPPP P P PP
Sbjct: 1359 PPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 696 PQPGQKRR-TPXGPXRXPXPPKPXXKPXXDFXGNXPRPPPKK 818
P+P R TP P R P P +P +P P PPP K
Sbjct: 538 PEPSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAK 579
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 31.5 bits (68), Expect = 0.86
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 719 NPGWAXKXPXPPKTXXKTPXXLXXKXXPPPPKKXP 823
NPG P PP+T P PPPP P
Sbjct: 118 NPGGVPAPPNPPRTCCPPPTPAAPPPPPPPPPPAP 152
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +2
Query: 713 APNPGWAXKXPXPPKTXXKTPXXLXXKXXPPPPKKXPXXXPPXXPP 850
AP G P PP K+ PPPP + P PP PP
Sbjct: 112 APQHGDHEASPPPPPPPRKSRAG-GSSPPPPPPPRVPRTPPPRSPP 156
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/75 (30%), Positives = 24/75 (32%)
Frame = +3
Query: 591 PXXALRPPXQXXXXXXXXXXXXXXXTPGTXKPAXXPQPGQKRRTPXGPXRXPXPPKPXXK 770
P A PP PG PA QPG R P GP P P P +
Sbjct: 157 PCEAASPPPCRVCPVGMPGEQGVTGAPGDKGPAG--QPG--RNGPDGPNGEPGPKGPPGQ 212
Query: 771 PXXDFXGNXPRPPPK 815
P D P P K
Sbjct: 213 PGADGQPGMPGEPGK 227
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +3
Query: 681 KPAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPP 809
+P Q G R P GP P PP P + P PP
Sbjct: 243 RPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGPP 285
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 710 KAPNPGWAXKXPXPPKTXXKTPXXLXXKXXPPPPKKXPXXXPPXXPP 850
K PN P PP L PPPP P P PP
Sbjct: 56 KDPNDNIVKATPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 743 PXPPKTXXKTPXXLXXKXXPPPPKKXPXXXPPXXPP 850
P PP P L PPPP PP PP
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 7/55 (12%)
Frame = +3
Query: 669 PGTXKPAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXG-------NXPRPPP 812
P PA P Q+R T P R PP P G N P PPP
Sbjct: 509 PTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPP 563
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 713 APNPGWAXKXPXPPKTXXKTPXXLXXKXXPPPPKKXPXXXPPXXPPXA 856
AP A P P T K K PP P P P PP A
Sbjct: 226 APVTAPAPNPPAPENTTAKVETTKPTKAAPPAPTPVPNPVPSPPPPPA 273
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +3
Query: 669 PGTXKPAXXPQP-GQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPP 809
PG+ PA P P G P P PP P P D P P
Sbjct: 182 PGSPGPAGPPGPAGPAGEDAAAPESPPGPPGPPGPPGKDGEAGAPGAP 229
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 112 CLSLXPPXXPPVPXXRAYXXXXPXPPP 192
C S+ PP PP P P PPP
Sbjct: 22 CCSMGPPPCPPPPPPMCAPPPLPCPPP 48
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +2
Query: 743 PXPPKTXXKTPXXLXXKXXPPPPKKXPXXXPPXXPP 850
P PP + P + PPPP PP PP
Sbjct: 92 PPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -1
Query: 849 GGXXGGXXXGXFLGGGGXCFXXSXXGVXXXVLGGXG 742
GG GG G GGGG C S G GG G
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCG 156
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -1
Query: 849 GGXXGGXXXGXFLGGGGXCFXXSXXGVXXXVLGGXG 742
GG GG G GGGG C S G GG G
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCG 156
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 684 PAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRP--PP 812
P + GQ+ R GP P P P P GN P P PP
Sbjct: 192 PGSPGKSGQRGRGLPGPSGAPGPQGPPGAPGQPGSGNAPGPAGPP 236
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 684 PAXXPQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRP--PP 812
P Q GQ+ R GP P P P P G+ P P PP
Sbjct: 190 PGRPGQSGQRSRGLPGPSGRPGPQGPPGAPGQPGSGSTPGPAGPP 234
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 696 PQPGQKRRTPXGPXRXPXPPKPXXKPXXDFXGNXPRPP 809
P PG P P PP P P F N P PP
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPP 745
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.143 0.478
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,596,305
Number of Sequences: 27780
Number of extensions: 248638
Number of successful extensions: 1018
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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