Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_F02
         (1042 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   6.7  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   6.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   8.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   8.9  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +1

Query: 544 DPLEAHTLDEARRTIRDLRMKYRAQAHXLLTWRR--AHRTQEELVSRLQ 684
           DPL A  ++E   T+ ++      Q   L+ W +   H T   L  ++Q
Sbjct: 197 DPLVALVVNENNTTVNNICQATHKQLFQLVQWAKLVPHFTSLPLTDQVQ 245


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 12/52 (23%), Positives = 25/52 (48%)
 Frame = -1

Query: 784 SL*QQCISFCFRTSRDSKRSSWLERLFSVRXFLAVVEKRALLGYDEHGAMSA 629
           S+ + C+S+CF     + +S+ L R   V   + +  K  +   +E  ++ A
Sbjct: 278 SIVKNCLSYCFNLYHLASKSNQLSREAKVTKTVLLGVKIDICNEEERNSVVA 329


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 784 SL*QQCISFCFRTSRDSKRSSWLER 710
           S+ + C+S+CF     + +S+ L R
Sbjct: 278 SIVKNCLSYCFNLYHLASKSNQLSR 302


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 343 KPIRHELNQKITVFNTKPSETIGTNHKLTFTFENLQIXHYETFL 212
           K +RH     I + NTK   T      L +TF ++ I    T+L
Sbjct: 323 KRVRHLQLVAIRLLNTKLQFTAKDFFNLDWTFCHMMIAALTTYL 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,341
Number of Sequences: 336
Number of extensions: 3897
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 29691936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)