Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_F02
         (1042 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0309 + 2312786-2313211,2313311-2313527,2313613-2313731,231...    30   3.5  
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338...    29   8.0  
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689...    29   8.0  

>11_01_0309 +
           2312786-2313211,2313311-2313527,2313613-2313731,
           2313921-2314019,2314498-2314551,2314635-2314733,
           2314838-2314945,2315418-2315694,2316051-2316160,
           2316425-2316493,2316608-2316714,2316754-2316792,
           2317126-2317171,2317593-2317619
          Length = 598

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 513 LRWAIQSRLASALRIHGGTFSW*YPVLMVKSLFFLLKTGPLESAKLYTAP 364
           +R  +QSR AS   I  G  +W  P+  + +LFFL      + A ++  P
Sbjct: 541 IRLLLQSRAASVQTIFHGQRAWCLPLSTLSALFFLKVAYESQRASVHLQP 590


>10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,
            3384640-3384709,3385878-3386002,3387128-3387268,
            3387362-3387519,3387644-3387803,3390136-3390213,
            3390326-3390385,3390473-3390528,3391886-3392090,
            3394107-3394192,3394296-3394406,3394536-3394607,
            3395453-3395538,3395730-3395878,3396107-3396250,
            3396335-3396442,3396997-3397027,3397609-3397713,
            3398283-3398407,3398807-3398950,3399073-3399177,
            3400748-3400799,3401549-3401696,3401936-3402130,
            3402404-3402647,3403152-3403259,3403887-3404034,
            3405467-3405525,3405876-3405945,3407008-3407333,
            3407666-3409204,3410526-3410733,3410870-3410906,
            3411024-3411072,3411143-3411271
          Length = 2025

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = -1

Query: 409  FKDWTSGISKVVHRSNKHTYNYKPI 335
            F+D++ GI  +VH S KH+ ++KP+
Sbjct: 1942 FEDFSKGIKAMVHASEKHS-SFKPL 1965


>01_01_0879 +
           6896587-6896701,6896819-6897005,6897475-6897774,
           6897877-6898133,6898596-6898825,6899122-6899247,
           6900195-6900374,6901079-6901216,6901515-6901670,
           6902409-6902699,6902923-6903162
          Length = 739

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -1

Query: 739 DSKRSSWLERLFSVRXFLAVVEKRALLGYDEHGAMSAXDAPVPCISFGDPLLFS 578
           D +   WL R  S    +  + K   L  DEHG ++A       + FGDP+  S
Sbjct: 208 DLEVGQWLRRHASGIHTIVAMNKSESL--DEHGVLTAAAGEAHRLGFGDPVAIS 259


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,520,221
Number of Sequences: 37544
Number of extensions: 430762
Number of successful extensions: 946
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3071102548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)