Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_F01
         (877 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              29   0.074
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    26   0.40 
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    24   1.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   8.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   8.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   8.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 28.7 bits (61), Expect = 0.074
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +1

Query: 433 RCSCKDEGSIPSERCRFSKLHSFGNGLYNIRRGLHLSEASVRS*TICHYPLENERTR 603
           R +C    S+   R      H   N   +IRR LH++  S+++  I  YP    R +
Sbjct: 133 RAACHSGSSLTKSRLMRCLHHDIENA--HIRRTLHMNRTSLKTSKIVSYPKSRSRKK 187


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = -1

Query: 73  RRERSLDDSKILRN 32
           RR++SLDD KILRN
Sbjct: 125 RRKKSLDDVKILRN 138


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 380 TPLKHDYKYTGVLTVPDPAVPARMKVRFPLSVAGS 484
           TP+ H  +Y G +  P P+   R +    L V+GS
Sbjct: 32  TPVIHFLQYPGCVPKPIPSYACRGRCSSYLQVSGS 66


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 737 LYLCSRLRMRRRVDLDNRSVI*STDHK 657
           +YL +R R+R R      + + ST H+
Sbjct: 219 IYLATRRRLRERARQSRINAVQSTRHR 245


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 737 LYLCSRLRMRRRVDLDNRSVI*STDHK 657
           +YL +R R+R R      + + ST H+
Sbjct: 219 IYLATRRRLRERARQSRINAVQSTRHR 245


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 737 LYLCSRLRMRRRVDLDNRSVI*STDHK 657
           +YL +R R+R R      + + ST H+
Sbjct: 219 IYLATRRRLRERARQSRINAVQSTRHR 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,425
Number of Sequences: 438
Number of extensions: 5184
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)