Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E24
         (907 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751...    31   0.95 
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072...    30   2.2  
03_05_0373 + 23581812-23583293                                         30   2.2  
01_01_0401 + 3043634-3043894,3045610-3045849                           30   2.9  
04_04_0285 - 24136865-24137000,24137554-24137611,24138142-241414...    28   8.9  
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    28   8.9  

>12_02_1035 -
           25570009-25571241,25571940-25573709,25573797-25575118,
           25575208-25575555,25576540-25576633
          Length = 1588

 Score = 31.5 bits (68), Expect = 0.95
 Identities = 18/53 (33%), Positives = 33/53 (62%)
 Frame = +2

Query: 488 EKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEGDQE 646
           EKLQ  + +  QE+Q+L KK+SS V E +++   ++ +  +  A+  QE ++E
Sbjct: 153 EKLQKEISSLSQENQELKKKISS-VLENSDRAESEVASLKEALAQ--QEAEKE 202


>10_08_0425 -
           17806117-17806401,17806862-17806984,17807076-17807222,
           17807307-17807450,17808557-17808668,17808762-17808898,
           17809016-17809156,17810921-17811004,17811275-17811742,
           17811858-17811936,17812494-17812506,17813884-17814460,
           17814502-17814774,17814899-17815045,17815354-17815413,
           17816124-17816510
          Length = 1058

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 24/94 (25%), Positives = 41/94 (43%)
 Frame = +3

Query: 18  LPFREFLKIXTHSSVFAVRFASPPHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPDFF 197
           LPF ++ K      VF  RF + P S SR+     ++V   A     +    +R A + +
Sbjct: 677 LPFSKWEK-ELPKIVFDPRFKAIP-SHSRRRSTFEQYVRTRADEERKEKRAAQRAAVEAY 734

Query: 198 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAW 299
           K +     E H  L  +   +  +KD ++F + W
Sbjct: 735 KQLLEEASEGHTILIHKMQDINSNKDYKEFKRKW 768


>03_05_0373 + 23581812-23583293
          Length = 493

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -1

Query: 463 DVQGGPCGAPRPCARCSASTVPKPPW 386
           D  GG   A    +RCSAST PK PW
Sbjct: 53  DGAGGYGSAASSPSRCSASTPPKSPW 78


>01_01_0401 + 3043634-3043894,3045610-3045849
          Length = 166

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
 Frame = -1

Query: 481 GGGVLLDVQGGPCGAPRPCARCSASTVP----KP---PWPCRSXXXXXXXXXXXXXLSCC 323
           GGG    +   P  +P   A+C A  VP    +P   P P R                 C
Sbjct: 23  GGGGGKKLHQSPPPSPPEAAKCCADGVPVVMGEPLGAPAPPRESWNSGVLSCLGRNDEFC 82

Query: 322 STDSEPSFQALLKSC 278
           S+D E SF+A  K C
Sbjct: 83  SSDVEGSFEAFTKQC 97


>04_04_0285 -
           24136865-24137000,24137554-24137611,24138142-24141480,
           24141789-24142218,24142861-24142928,24143015-24143165
          Length = 1393

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = +2

Query: 461 VEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDD 613
           +EK++ ++ E+ Q+    + Q+ +K AKKVSS   E+ +    K +  Y +
Sbjct: 516 LEKSSKSILEETQSVGHTSQQKKRKKAKKVSSVDMESLDISGEKDQCGYGE 566


>01_06_0124 -
           26692731-26697046,26698749-26698827,26698899-26698955,
           26699321-26699416
          Length = 1515

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = +2

Query: 464 EKNATALR-EKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKA 601
           EKNA  L+ ++L+A ++N   E ++   +VS+ +++ NE+L  KI +
Sbjct: 832 EKNAALLQVQQLEANLKNLESELEQKQSQVSA-LEQANEELREKISS 877


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,109,411
Number of Sequences: 37544
Number of extensions: 269115
Number of successful extensions: 1194
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)