Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_E24
(907 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 cha... 32 1.2
M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein ( D.me... 32 1.2
BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p pro... 32 1.2
AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p pro... 32 1.2
AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB... 32 1.2
AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA... 32 1.2
AY060750-1|AAL28298.1| 147|Drosophila melanogaster GH20124p pro... 30 5.0
AE014297-1848|AAF55052.1| 147|Drosophila melanogaster CG8489-PA... 30 5.0
X03810-2|CAA27435.1| 717|Drosophila melanogaster hsp 82 protein. 29 6.6
AY122080-1|AAM52592.1| 717|Drosophila melanogaster AT20544p pro... 29 6.6
AE014296-590|AAF47734.1| 717|Drosophila melanogaster CG1242-PA ... 29 6.6
>M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 chain
protein.
Length = 1788
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 352 SXXALGDANGKAKEALEQSRQNIERTAEELRK 447
S A ++ GKAK+A++Q+ NIE ++L K
Sbjct: 1600 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631
>M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein (
D.melanogaster lamininB1 subunit mRNA, complete cds. ).
Length = 1788
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 352 SXXALGDANGKAKEALEQSRQNIERTAEELRK 447
S A ++ GKAK+A++Q+ NIE ++L K
Sbjct: 1600 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631
>BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p protein.
Length = 1296
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 352 SXXALGDANGKAKEALEQSRQNIERTAEELRK 447
S A ++ GKAK+A++Q+ NIE ++L K
Sbjct: 1108 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1139
>AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p
protein.
Length = 1026
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 352 SXXALGDANGKAKEALEQSRQNIERTAEELRK 447
S A ++ GKAK+A++Q+ NIE ++L K
Sbjct: 838 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 869
>AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB,
isoform B protein.
Length = 1788
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 352 SXXALGDANGKAKEALEQSRQNIERTAEELRK 447
S A ++ GKAK+A++Q+ NIE ++L K
Sbjct: 1600 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631
>AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA,
isoform A protein.
Length = 1788
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 352 SXXALGDANGKAKEALEQSRQNIERTAEELRK 447
S A ++ GKAK+A++Q+ NIE ++L K
Sbjct: 1600 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631
>AY060750-1|AAL28298.1| 147|Drosophila melanogaster GH20124p
protein.
Length = 147
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 457 QGGPCGAPRPCARCSASTVPKPPWPCRS 374
QGGP G PR + S T+ KP PC+S
Sbjct: 66 QGGPNGPPRRRKKRSFYTMTKPTPPCQS 93
>AE014297-1848|AAF55052.1| 147|Drosophila melanogaster CG8489-PA
protein.
Length = 147
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 457 QGGPCGAPRPCARCSASTVPKPPWPCRS 374
QGGP G PR + S T+ KP PC+S
Sbjct: 66 QGGPNGPPRRRKKRSFYTMTKPTPPCQS 93
>X03810-2|CAA27435.1| 717|Drosophila melanogaster hsp 82 protein.
Length = 717
Score = 29.5 bits (63), Expect = 6.6
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 485 REKLQAAVQNTVQE--SQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEGDQEDPGG 658
RE LQ QN V + + L KK ++E E K YD F+KN + G ED
Sbjct: 385 REMLQ---QNKVLKVIRKNLVKKTMELIEELTED-KENYKKFYDQFSKNLKLGVHEDSNN 440
Query: 659 RQRQA 673
R + A
Sbjct: 441 RAKLA 445
>AY122080-1|AAM52592.1| 717|Drosophila melanogaster AT20544p
protein.
Length = 717
Score = 29.5 bits (63), Expect = 6.6
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 485 REKLQAAVQNTVQE--SQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEGDQEDPGG 658
RE LQ QN V + + L KK ++E E K YD F+KN + G ED
Sbjct: 385 REMLQ---QNKVLKVIRKNLVKKTMELIEELTED-KENYKKFYDQFSKNLKLGVHEDSNN 440
Query: 659 RQRQA 673
R + A
Sbjct: 441 RAKLA 445
>AE014296-590|AAF47734.1| 717|Drosophila melanogaster CG1242-PA
protein.
Length = 717
Score = 29.5 bits (63), Expect = 6.6
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 485 REKLQAAVQNTVQE--SQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEGDQEDPGG 658
RE LQ QN V + + L KK ++E E K YD F+KN + G ED
Sbjct: 385 REMLQ---QNKVLKVIRKNLVKKTMELIEELTED-KENYKKFYDQFSKNLKLGVHEDSNN 440
Query: 659 RQRQA 673
R + A
Sbjct: 441 RAKLA 445
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,418,870
Number of Sequences: 53049
Number of extensions: 436542
Number of successful extensions: 2204
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2201
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -