Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E23
         (887 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   2.1  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    23   2.8  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   3.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   4.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   4.9  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   4.9  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   6.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   8.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 326  GERAKLTCSPDYAYGQQGHPGVIPPNST 409
            GER  L  S DY Y  +G  G    +ST
Sbjct: 1579 GERVMLKASEDYRYSVRGLCGNFDHDST 1606


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 713 LRDVSVSDKIESMIFRISFI 654
           ++DV++ DK   +IF +SF+
Sbjct: 458 IKDVNIIDKYSRIIFPVSFM 477


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 263 FRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 355
           FRI   E  R W     K+ + +  KL C P
Sbjct: 249 FRIQVDECDRLWILDSGKVDIAKGGKLACPP 279


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 15/62 (24%), Positives = 26/62 (41%)
 Frame = -3

Query: 450 CIYSRRRSSTSKISVELGGMTPGWPC*P*A*SGEQVNLARSPTDIFATPSSQPRITSDFP 271
           C   R+  S S   +E G   P  P           + + +PT + ++P S+ +   D P
Sbjct: 568 CPRFRKLDSPSDSGIESGTEKPDKPA--------SSSASSAPTSVCSSPRSEDKEVEDMP 619

Query: 270 IL 265
           +L
Sbjct: 620 VL 621


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 99  YFFEIKILALAMRSRQVKILRNSL 28
           YF+EI    L + S   KI RNSL
Sbjct: 539 YFYEIDNWMLDLNSGLNKITRNSL 562


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 99  YFFEIKILALAMRSRQVKILRNSL 28
           YF+EI    L + S   KI RNSL
Sbjct: 539 YFYEIDNWMLDLNSGLNKITRNSL 562


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 619 FHIIGNKFMVRLINEILKII 678
           +HI+G   ++ L+NE  K I
Sbjct: 4   YHIVGASVLICLLNETAKAI 23


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 43  DFDLSRPHCESEDLYLEKIEKYIVNNGCY 129
           DF   +   + ED+    I+KY+ N  C+
Sbjct: 50  DFIKMQELLQEEDISEGNIKKYLTNYSCF 78


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 91  RDKDPRSRNAV*TSQNLKEFPIVKSVXE 8
           R+K+P+ +NAV     LK   + K V +
Sbjct: 28  RNKNPQPKNAVCALNELKSGAVYKVVDQ 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,040
Number of Sequences: 438
Number of extensions: 4910
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)