Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E22
         (883 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   2.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   4.9  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   6.5  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 741 MFLSSIWVEXLRRVILTI 794
           M LSS W E +  V+LTI
Sbjct: 1   MLLSSAWFEVIAAVLLTI 18


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 398 DPKIQQDMKHWPF 436
           DP + +D +HW F
Sbjct: 855 DPAVYEDWRHWKF 867


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 624 RWESLKYAGTVTTASRTVLP 565
           +W+S+  +GT T  +RT+ P
Sbjct: 448 QWKSILESGTTTLQTRTMHP 467


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 620 QRQATKDAGAIAGLNVLRIINEPTAAALAYG 712
           Q +A K A  +   N   II+EPT     YG
Sbjct: 353 QAEAEKHAAMLYQYNFNIIISEPTERISPYG 383


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,808
Number of Sequences: 438
Number of extensions: 5531
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)