Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_E21
(886 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 30 0.38
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 28 2.0
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 27 3.6
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 4.7
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 26 6.2
SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|ch... 26 6.2
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 26 6.2
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 26 8.2
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 26 8.2
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 30.3 bits (65), Expect = 0.38
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 223 SLWSNLANEMQHLDDMMKELSLKFPSIINEGRV 321
+L S L LDD+ K L+L FP++I + RV
Sbjct: 167 ALQSQLVRVNGELDDLQKHLTLSFPTLIAKSRV 199
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = -3
Query: 734 LRIVSDVDSVRGRFYSFRDLIVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATG 555
++I+ + S FY + V+WA+ T L++++S+ T +SV +A G
Sbjct: 68 IQIILSIVSAALSFYLDTNA-VWWAIRTITHLEIVGLNILSSLKYGSTLFSWISVANAFG 126
Query: 554 LLL 546
LLL
Sbjct: 127 LLL 129
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +1
Query: 202 ESMLDTHSLWSNLANEMQHLDDMMKELSLKFPSIINEGRVEGDKYQISIHLPGYEQKDIN 381
E + + +W+++ +MQ D ++L F I N G++ Q +I L G + ++
Sbjct: 104 EGSTNVNEVWNDITEDMQSQDFSTEDLKQLFLLIFNNGKLR-TLLQNAIVLLGQQTTNVA 162
Query: 382 VKAKN 396
K N
Sbjct: 163 SKKLN 167
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 26.6 bits (56), Expect = 4.7
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = -3
Query: 731 RIVSDVDSVRGRFYSFRDLIVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGL 552
+I S + S + SF + W S+T S N+ G+ A GL
Sbjct: 332 QIFSSLQSAKSASVSFSRSYIDWNPEGFMFHSKTKKSSFNTSLGEFISNGIYEARKALGL 391
Query: 551 LLSSGC----FCFSGKVIFNTSFS 492
L GC F FS +V FN S S
Sbjct: 392 LTPIGCSPKKFAFS-EVPFNDSNS 414
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 26.2 bits (55), Expect = 6.2
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 466 VNSEGSWVYEKDVLKITFPLKQ-KQPEDSKRPVAEPTETTPTNVSREEMEFTTESNV--R 636
VNS G+ E + F ++ ++ E+ K + P P S+EE E R
Sbjct: 323 VNSPGALSVEATYINQNFCVQALRETEEEKYKLPHPN---PFYNSKEESEPLAAHGYIYR 379
Query: 637 DVDVGLETAQKTMR 678
DVD+ LET +K ++
Sbjct: 380 DVDLSLETDEKPVK 393
>SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 667
Score = 26.2 bits (55), Expect = 6.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -3
Query: 692 YSFRDLIVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLLSSGCFC 528
YS R++I W V ST+ LSV ++S TF+GV + TG + +C
Sbjct: 72 YSLRNII--WDVLAGCSTA--CLSVPIALSFAQTFLGVPPIYILTGTAIGPILYC 122
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 586 TNVSREEMEFTTESNVRDVDVGLETAQKTMRSRKL*XRP 702
T+ R E E ++SN D D+ + Q T+ RKL P
Sbjct: 245 TSEQRAERERESQSNYADHDLWADDDQATVNQRKLDYAP 283
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 114 AAVSAAPQYYHGSSHWPYHHYDPFQSL 194
A +A PQYY +P HY P Q L
Sbjct: 502 ATDAAKPQYYIPKDPYPVPHYYPQQPL 528
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 25.8 bits (54), Expect = 8.2
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Frame = +1
Query: 220 HSLWSNLANEMQHLDD--MMKELSL-KFPSI-INEGRVEGDKYQISIHLPGY---EQKDI 378
H++ N A E ++D ++K +S F S+ + + R GD + I I + + I
Sbjct: 573 HTIVPNSAPEHPSINDYKILKPISKGAFGSVYLAQKRTTGDYFAIKILKKSNMIAKNQVI 632
Query: 379 NVKAKNGVLMVQANSAF 429
NV+A+ +LM Q S F
Sbjct: 633 NVRAERAILMSQGESPF 649
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,351,939
Number of Sequences: 5004
Number of extensions: 68477
Number of successful extensions: 223
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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