Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E19
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0379 + 23628200-23628366,23629074-23629133,23630177-236302...    36   0.043
03_05_0377 + 23613181-23613342,23614469-23614501,23614606-236148...    36   0.043
03_05_0380 + 23636675-23636845,23637646-23637678,23637794-23638132     31   1.2  
03_02_0275 + 7042433-7042732,7042864-7043140,7043751-7044231,704...    30   2.1  

>03_05_0379 +
           23628200-23628366,23629074-23629133,23630177-23630209,
           23630253-23630665,23631522-23632008,23632623-23633334
          Length = 623

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 756 SALXCGHYFCNDCWAMH 806
           S + CGH FCNDCW  H
Sbjct: 213 STMDCGHCFCNDCWTEH 229


>03_05_0377 +
           23613181-23613342,23614469-23614501,23614606-23614879,
           23615105-23615585,23616174-23616846
          Length = 540

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 756 SALXCGHYFCNDCWAMH 806
           S + CGH FCNDCW  H
Sbjct: 145 STMDCGHCFCNDCWTEH 161


>03_05_0380 + 23636675-23636845,23637646-23637678,23637794-23638132
          Length = 180

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 744 LHKYSALXCGHYFCNDC 794
           L   SA+ CGH FCNDC
Sbjct: 156 LGSVSAMDCGHCFCNDC 172


>03_02_0275 +
           7042433-7042732,7042864-7043140,7043751-7044231,
           7044943-7045491,7045556-7045680,7045824-7045966
          Length = 624

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 756 SALXCGHYFCNDCW 797
           S + CGH +CN+CW
Sbjct: 181 SKMDCGHNYCNECW 194


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,106,973
Number of Sequences: 37544
Number of extensions: 231739
Number of successful extensions: 444
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)