Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E19
         (880 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003137-7|AAN84856.1|  433|Caenorhabditis elegans Hypothetical ...    36   0.029
AF003137-6|AAB93644.1|  497|Caenorhabditis elegans Hypothetical ...    36   0.029
AF003137-5|AAB93643.1|  491|Caenorhabditis elegans Hypothetical ...    35   0.088
AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical ...    34   0.15 
U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical pr...    31   0.82 

>AF003137-7|AAN84856.1|  433|Caenorhabditis elegans Hypothetical
           protein C27A12.7b protein.
          Length = 433

 Score = 36.3 bits (80), Expect = 0.029
 Identities = 16/79 (20%), Positives = 31/79 (39%)
 Frame = +3

Query: 561 QITPSLAKVALHAYEWNAQEIIXKYKENANEVLVFSRVKXXXXXXXXXXXXXXXXXXXTP 740
           Q+ P + ++ LH Y+WN + ++ +  E+  + + F                         
Sbjct: 13  QVDPGVCRILLHKYKWNKESLLERLYEHP-DTIAFLIDAQVIPRQQEVIPAGDAECDICC 71

Query: 741 QLHKYSALXCGHYFCNDCW 797
            + + S L C H  C +CW
Sbjct: 72  SMDELSGLSCNHRACAECW 90


>AF003137-6|AAB93644.1|  497|Caenorhabditis elegans Hypothetical
           protein C27A12.7a protein.
          Length = 497

 Score = 36.3 bits (80), Expect = 0.029
 Identities = 16/79 (20%), Positives = 31/79 (39%)
 Frame = +3

Query: 561 QITPSLAKVALHAYEWNAQEIIXKYKENANEVLVFSRVKXXXXXXXXXXXXXXXXXXXTP 740
           Q+ P + ++ LH Y+WN + ++ +  E+  + + F                         
Sbjct: 77  QVDPGVCRILLHKYKWNKESLLERLYEHP-DTIAFLIDAQVIPRQQEVIPAGDAECDICC 135

Query: 741 QLHKYSALXCGHYFCNDCW 797
            + + S L C H  C +CW
Sbjct: 136 SMDELSGLSCNHRACAECW 154


>AF003137-5|AAB93643.1|  491|Caenorhabditis elegans Hypothetical
           protein C27A12.6 protein.
          Length = 491

 Score = 34.7 bits (76), Expect = 0.088
 Identities = 15/79 (18%), Positives = 31/79 (39%)
 Frame = +3

Query: 561 QITPSLAKVALHAYEWNAQEIIXKYKENANEVLVFSRVKXXXXXXXXXXXXXXXXXXXTP 740
           Q+   + ++ LH Y+WN + ++ ++ E+  + + F                         
Sbjct: 72  QVKTGVCRILLHKYKWNKESLLERFYEHP-DTIAFLIDAQVIPRQQEVIPAGDAECDICC 130

Query: 741 QLHKYSALXCGHYFCNDCW 797
            + + S L C H  C +CW
Sbjct: 131 SMDELSGLSCNHRACAECW 149


>AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical
           protein C27A12.8 protein.
          Length = 494

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 16/79 (20%), Positives = 29/79 (36%)
 Frame = +3

Query: 561 QITPSLAKVALHAYEWNAQEIIXKYKENANEVLVFSRVKXXXXXXXXXXXXXXXXXXXTP 740
           Q+   + ++ LH Y+WN + ++ ++ E+  +   F                         
Sbjct: 74  QVKTGVCRILLHKYKWNKESLLERFYEHP-DTTTFLIDAHVIPRRQERLPAGDAECDICC 132

Query: 741 QLHKYSALXCGHYFCNDCW 797
            L + S L C H  C  CW
Sbjct: 133 SLGELSGLSCNHRACTQCW 151


>U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical
           protein T12E12.1 protein.
          Length = 482

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 762 LXCGHYFCNDCWAMHXE 812
           L CGH FC  CW  H E
Sbjct: 143 LTCGHCFCEHCWKSHVE 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,487,759
Number of Sequences: 27780
Number of extensions: 224092
Number of successful extensions: 448
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)