Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_E18
(900 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 112 7e-26
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 54 3e-08
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 50 3e-07
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 45 2e-05
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 44 2e-05
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 44 2e-05
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 44 4e-05
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 44 4e-05
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 43 5e-05
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 43 7e-05
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 42 2e-04
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 42 2e-04
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 41 2e-04
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 41 2e-04
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 39 8e-04
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 39 0.001
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 39 0.001
SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr 1|... 37 0.004
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 36 0.006
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 36 0.008
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 36 0.008
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 35 0.018
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 35 0.018
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 34 0.032
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 33 0.042
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 33 0.055
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 33 0.073
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 33 0.073
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 31 0.17
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 31 0.29
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 31 0.29
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 30 0.52
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 30 0.52
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 30 0.52
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 29 0.90
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 29 1.2
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 29 1.2
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 29 1.2
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 29 1.2
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 28 1.6
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 28 1.6
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 28 1.6
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 27 2.7
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 27 2.7
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 27 3.6
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 27 3.6
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 27 3.6
SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|... 27 4.8
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 8.4
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 112 bits (269), Expect = 7e-26
Identities = 49/99 (49%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS-MVAAAGFQHIRLYDLSSANPD 545
+ GYDHTI+ W+A SG+C RT+QH DSQVN L ISP +AAAG H+RLYD+++++
Sbjct: 15 SSGYDHTIRFWEALSGICSRTIQHADSQVNRLCISPDKKFLAAAGNPHVRLYDINTSSQM 74
Query: 546 PVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 662
P+ TFE + NV+ + F +G W+ T ED T ++WD R
Sbjct: 75 PLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMR 113
Score = 26.2 bits (55), Expect = 6.3
Identities = 8/27 (29%), Positives = 20/27 (74%)
Frame = +2
Query: 686 QKIFQVQAPVNAVMLHPDQSQIMVGDR 766
Q+ + ++PVN +++HP+Q +++ D+
Sbjct: 118 QRNYDHKSPVNDLLIHPNQGELLSCDQ 144
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 54.0 bits (124), Expect = 3e-08
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT--SMVAAAGFQHIRLYDLSSANP 542
TG D T +LW H G +R V ++ I+P +M +A I L+D+ +
Sbjct: 480 TGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRR 539
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
+ T N+ + F + T + +GG DCT R WD
Sbjct: 540 --IKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWD 575
Score = 39.5 bits (88), Expect = 6e-04
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Frame = +3
Query: 417 VCLRTMQHPDSQVNSLEISPTSMVAAAGFQ--HIRLYDLSSANPD--PVTTFEDISKNV- 581
VC+ T H ++ +N E SP S + A GFQ +IRL+ + + T+ ED +V
Sbjct: 315 VCMYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVR 374
Query: 582 --SRVG------FQKNGTWMYTGGEDCTARIW 653
S G F + ++ + ED +AR+W
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLW 406
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 50.4 bits (115), Expect = 3e-07
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT--SMVAAAGFQHIRLYDLSSANP 542
+ YD T+++W+A +GVCL ++ +V S+ I+P+ ++A IR+++L S
Sbjct: 592 SASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESG-- 649
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
+ + T S VS+V F +N + D + R+WD
Sbjct: 650 ELLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRVWD 687
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEI 470
TG D T+++W +G C + S + ++I
Sbjct: 461 TGSTDRTVRVWDLRTGECKQVFYGHTSTIRCIKI 494
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 44.8 bits (101), Expect = 2e-05
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT-SMVAAAGFQHI-RLYDLSSANP 542
+G +D T+++W G CLR + + S+ IS ++ A A + + R++D+ S
Sbjct: 155 SGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQ- 213
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 662
T E I+ +S + F +N ++ + R+WD R
Sbjct: 214 CLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYR 253
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 44.4 bits (100), Expect = 2e-05
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSANP 542
TG DHT ++W +G +R S V++L +S + A+ + I+++DL S+N
Sbjct: 504 TGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQ 563
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
+F S V + F + + +GG D WD
Sbjct: 564 H--VSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWD 599
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 44.4 bits (100), Expect = 2e-05
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGF--QHIRLYDLSSANP 542
+G YD +I++W+ +G CL ++ ++ S+ P + +G + IR++DLS+
Sbjct: 522 SGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTC 581
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
V D + V FQ + +G D T RIWD
Sbjct: 582 KYVLEGHDAFVTLLNV-FQNR---LISGSADSTIRIWD 615
Score = 40.7 bits (91), Expect = 3e-04
Identities = 23/106 (21%), Positives = 47/106 (44%)
Frame = +3
Query: 345 EDRRWL*XTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYD 524
E R + +G D +I++W +G C ++ D+ V L + +++ + IR++D
Sbjct: 556 EPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNRLISGSADSTIRIWD 615
Query: 525 LSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 662
L++ P V + N + + G D + ++WD R
Sbjct: 616 LNTGKPLMV-----LPSNSGYISSFVSDEHKIISGNDGSVKLWDVR 656
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 43.6 bits (98), Expect = 4e-05
Identities = 25/97 (25%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQ-HPDSQVNSLEISP-TSMVAAAGFQHIRLYDLSSANP 542
+G D TI++W + C++T++ H + + + IS T +V+AA ++++ LSS
Sbjct: 524 SGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSG-- 581
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 653
+ V T ++ V + + +G+ + +GG D +W
Sbjct: 582 ECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 31.5 bits (68), Expect = 0.17
Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
Frame = +3
Query: 357 WL*XTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLS 530
W+ +G D ++LW +S + + S + L PT +G + ++++++
Sbjct: 160 WVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
Query: 531 SANP-DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
+ + F + + + V Q +YT GE WD
Sbjct: 220 KRSAVRTIPVFHSV-EAIGWVNGQPEEKILYTAGEGNLILAWD 261
Score = 30.7 bits (66), Expect = 0.29
Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Frame = +3
Query: 321 LVIPXXXXEDRRWL*XTGGYDHTIKLWQAH--SGV--CLRTMQHPDSQVNSLEISP---- 476
+V+ ED WL TG D+T++LW + V C+ + V ++ + P
Sbjct: 366 IVLTLDSSEDGVWL-ATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVN 424
Query: 477 ---TSMVAAAGFQHIRLYDLSSA------NPDPVTTFEDISKNVSRVGFQKNGTWMYTGG 629
T + +++ + ++ ++L S + V T + ++V+ + K+G + +
Sbjct: 425 GYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASAS 484
Query: 630 EDCTARIWD 656
+D T ++WD
Sbjct: 485 QDKTIKLWD 493
Score = 30.7 bits (66), Expect = 0.29
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +3
Query: 381 DHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS--MVAAAGFQHIRLYDLSSANPDPVT 554
D TIKLW + +G + ++ V + +P S + + +G + IR++++ + V
Sbjct: 486 DKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDT--QQCVQ 543
Query: 555 TFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 653
T E + + ++ + GT + + D ++W
Sbjct: 544 TLEGHTGAILKLIYISQGTQVVSAAADGLVKVW 576
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 43.6 bits (98), Expect = 4e-05
Identities = 27/107 (25%), Positives = 49/107 (45%)
Frame = +3
Query: 351 RRWL*XTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLS 530
+ W+ + YD TI++W A G CL ++ ++VN L +S T V +G YD +
Sbjct: 280 QNWI-YSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLS-TEHVLRSG-----AYDHT 332
Query: 531 SANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRGCT 671
P + +K +++G + + +D +WDP+ T
Sbjct: 333 DFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKST 379
Score = 40.3 bits (90), Expect = 4e-04
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +3
Query: 420 CLRTMQHPDSQVNSLEISPTS---MVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRV 590
C +M D + S + SP++ +V +G RL+D + P + T + + VS V
Sbjct: 126 CTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTP--IATMKGHTNWVSCV 183
Query: 591 GFQKNGTWMYTGGEDCTARIWDP-RGCTTYXGVKRYSK 701
+ + + + TG D T R WDP +G ++R++K
Sbjct: 184 AWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTK 221
Score = 31.1 bits (67), Expect = 0.22
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDP 548
+G YDHT ++ S + + ++ L+ S +V+A+ + L+D + P
Sbjct: 326 SGAYDHTDFKPKSFSDERRKAKERYEA---CLKQSGERLVSASDDLQLILWDPQKSTK-P 381
Query: 549 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
+T K V+ F +G + T D + R+WD
Sbjct: 382 ITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWD 417
Score = 31.1 bits (67), Expect = 0.22
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSANP 542
T +D +++LW +G L T++ + V S S + + Q ++++D+ S
Sbjct: 406 TASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKM 465
Query: 543 D-PVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 653
+ ED V V + +G + +GG D RIW
Sbjct: 466 KFDLPGHED---QVFAVDWSPDGQRVASGGADKAVRIW 500
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 43.2 bits (97), Expect = 5e-05
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +3
Query: 369 TGGYDHTIKLWQAH-SGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPD 545
+GGYD TI+LW + + + H ++ L + S V +AG I+++DL +
Sbjct: 182 SGGYDGTIRLWDTRIADPEVMSFSHGEAIDVVLPMQSGSTVISAGGPSIKVWDLVAGRQT 241
Query: 546 PVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRGCTTYXGVK 689
P + K+++ + T + +GG D +I++ G+K
Sbjct: 242 PTKKLSNHQKSITCLAMNSENTRLLSGGLDGHVKIYNISDWKVVHGMK 289
Score = 31.9 bits (69), Expect = 0.13
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQ-HPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPD 545
+G D T+K+W +G + H D + +S T +V+ IRL+D A+P+
Sbjct: 141 SGSDDKTVKVWDLSTGAVQYDLSGHEDYVRTASWMSATRLVSGGYDGTIRLWDTRIADPE 200
Query: 546 PVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
V +F + Q T + GG + ++WD
Sbjct: 201 -VMSFSHGEAIDVVLPMQSGSTVISAGGP--SIKVWD 234
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 477 TSMVAAAGFQHIRLYDLSS-ANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 653
T+ ++ + + ++++DLS+ A ++ ED + S + + T + +GG D T R+W
Sbjct: 137 TTFLSGSDDKTVKVWDLSTGAVQYDLSGHEDYVRTASWM----SATRLVSGGYDGTIRLW 192
Query: 654 DPR 662
D R
Sbjct: 193 DTR 195
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 42.7 bits (96), Expect = 7e-05
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Frame = +3
Query: 378 YDHTIKLWQAHSGVCLRTMQHPDSQVNSLEIS-----PTSMVAAAGFQHIRLYDLSSANP 542
+D TIKLW G CL + D N ++ P +A + I +D+ S P
Sbjct: 330 FDKTIKLWDTELGKCLNCF-NSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIRS--P 386
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
D V ++ ++ + F +NG T +D + R W+
Sbjct: 387 DIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWE 424
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 41.5 bits (93), Expect = 2e-04
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGF--QHIRLYDLSSANP 542
+G D T +LW +G C+ ++ ++ V ++ ISP A G Q IR++ +S
Sbjct: 419 SGSGDRTARLWDVETGQCILKLE-IENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGT-- 475
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
V E ++V + F + + + +G D T ++W+
Sbjct: 476 -LVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWE 512
Score = 36.7 bits (81), Expect = 0.004
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 444 DSQVNSLEISPTSMVAAAGFQ--HIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWM 617
D V ++ SP G + I+L+DLS+ V F +++ + F NG ++
Sbjct: 360 DLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYV--FSGHEQDIYSLDFSHNGRFI 417
Query: 618 YTGGEDCTARIWD 656
+G D TAR+WD
Sbjct: 418 VSGSGDRTARLWD 430
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 41.5 bits (93), Expect = 2e-04
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSANP 542
TGG D KLW + C T S +NS+ P++ G + R +D+ A+
Sbjct: 165 TGGCDKLAKLWDLRAAYCCATFPGNTSDINSISFFPSNADFVTGAEDGIARCFDI-RASA 223
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
+ S ++ V F K+G ++ +D T +WD
Sbjct: 224 EIFQYSSPSSSPINSVLFSKSGKLLFI-AKDKTCEVWD 260
Score = 26.2 bits (55), Expect = 6.3
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQ-VNSLEISPTS-MVAAAGFQHIRLYDLSSANP 542
TG D + + + + P S +NS+ S + ++ A + ++D S +
Sbjct: 207 TGAEDGIARCFDIRASAEIFQYSSPSSSPINSVLFSKSGKLLFIAKDKTCEVWD--SISS 264
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRG 665
+T+ +S + +GT + TG D R+W G
Sbjct: 265 KTITSLTGHENRISSLALTSDGTMLATGSWDECVRLWSSSG 305
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 41.1 bits (92), Expect = 2e-04
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 375 GYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGF--QHIRLYDLSSANPDP 548
G D I++W ++G R + +Q+N++ + S + A+G +RL+D S + P
Sbjct: 75 GGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSP 134
Query: 549 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 662
+ D +VS + ++ + TG D T R +D R
Sbjct: 135 IQVLADAKDSVSSIDIAEH--LIVTGSTDGTLRTYDIR 170
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/98 (18%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 375 GYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEI--SPTSMVAAAGFQHIRLYDLSSANPDP 548
G + ++LW SG C+ ++ L++ T + G + I+++D+++ D
Sbjct: 33 GNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFIQVWDVNTGKVD- 91
Query: 549 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 662
++ + + ++ + + +G D R+WD R
Sbjct: 92 -RRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCR 128
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 41.1 bits (92), Expect = 2e-04
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS--MVAAAGFQHIRLYDLSSANP 542
TG D+T+ LW+A L ++ ++V + P+ +V+A+ RL+D+ +
Sbjct: 240 TGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVE 299
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 662
+ E S+ + + Q +G+ + +GG D RIWD R
Sbjct: 300 --LLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLR 337
Score = 34.3 bits (75), Expect = 0.024
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPT--SMVAAAGFQHIRLYDLSSANP 542
+GG D ++W SG + + Q+ ++ SP + ++ ++++DL +
Sbjct: 324 SGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVS- 382
Query: 543 DPVTTFEDISKNVSRVGFQKNGT--WMYTGGEDCTARIWDPRGCT 671
T S VS V + ++G ++ T G D ++W+P C+
Sbjct: 383 -LAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCS 426
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 39.1 bits (87), Expect = 8e-04
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRL--YDLSSANP 542
TG +DHTIK W +G C+ T+ V L + + +G L +D+SS
Sbjct: 107 TGSWDHTIKKWNVSTGECVETLIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWDVSSQPS 166
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 653
+ S+ + + Q N +T G + + R W
Sbjct: 167 RLLYKLTGHSRGIECITRQPNTDIFWTCGSESSIRCW 203
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 38.7 bits (86), Expect = 0.001
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 12/107 (11%)
Frame = +3
Query: 369 TGGYDHTIKLWQAH------------SGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHI 512
+G D+TIKLW+ G+C +T + S+ +SP +G +
Sbjct: 475 SGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDR 534
Query: 513 RLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 653
+ S +P T + + +V V NG TG D ARIW
Sbjct: 535 TIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 581
Score = 32.3 bits (70), Expect = 0.097
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 444 DSQVNSLEISPTSMVAAAGF--QHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWM 617
D V S+ SP A G Q IR++D++ + T + + + + F K+G +
Sbjct: 334 DLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHE--QEIYSLDFSKDGKTL 391
Query: 618 YTGGEDCTARIWD 656
+G D T +WD
Sbjct: 392 VSGSGDRTVCLWD 404
Score = 31.9 bits (69), Expect = 0.13
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 12/108 (11%)
Frame = +3
Query: 372 GGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGF--QHIRLYDLSS-ANP 542
G D I++W + SG + + + V S+ SP +G I+L++L +N
Sbjct: 435 GSLDKVIRIWTS-SGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNV 493
Query: 543 DPVT---------TFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDP 659
P TF + V +G W+ +G +D T + W P
Sbjct: 494 APSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSP 541
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 38.7 bits (86), Expect = 0.001
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS--MVAAAGFQHIRLYDLSSANP 542
TG D TIK+W SGV T+ + V L +SP + + + ++ +DL +
Sbjct: 180 TGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNK- 238
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 662
+ + V + + T G D AR+WD R
Sbjct: 239 -VIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMR 277
>SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 36.7 bits (81), Expect = 0.004
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +3
Query: 381 DHTIKLWQAH-SGVCLRTMQHPDSQVNSLEISPTSMVAAAG---FQHIRLYDLSSANPDP 548
D T+KLW+ + S CL + P + + + PT +V A I LYD+ + DP
Sbjct: 129 DKTLKLWKMNQSSRCLGNLDLPSLGIPAYD--PTGLVFAVACHSLSRIFLYDVRNYGSDP 186
Query: 549 VTTFE-DISKNVSRVGF 596
+TF D S+ +SR F
Sbjct: 187 FSTFTIDDSRYLSRFSF 203
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 36.3 bits (80), Expect = 0.006
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Frame = +3
Query: 381 DHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS----MVAAAGFQHIRLYDLSSANPDP 548
D T+K+W S V T+Q D VN + P ++ A I+++D +
Sbjct: 163 DGTVKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQT--KAC 220
Query: 549 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 653
V E + NVS F + +G ED T +IW
Sbjct: 221 VRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIW 255
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 35.9 bits (79), Expect = 0.008
Identities = 20/95 (21%), Positives = 48/95 (50%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDP 548
+G YD TI+LW + + ++ S V L+ +++ + + IR+++ ++ +
Sbjct: 288 SGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNYRTS--EC 345
Query: 549 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 653
++ + +V + F + T + +G DCT ++W
Sbjct: 346 ISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLW 378
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 354 RWL*XTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDL 527
R L +G D TIK+W + CL T V SL ++ + + + + I+ +D+
Sbjct: 404 RGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDI 461
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 35.9 bits (79), Expect = 0.008
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +3
Query: 453 VNSLEISPTSMVAAAGFQH--IRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWM-YT 623
+ SL + P + AG ++ +R ++ SS N +T F S V + F +NG W+ T
Sbjct: 336 ITSLAVHPDGNLFVAGLENGELRFFETSSGNE--LTKFGPHSSPVKTLQFGENGYWLVVT 393
Query: 624 GGEDCTARIWDPR 662
+D IWD R
Sbjct: 394 TNDDSDIFIWDLR 406
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 34.7 bits (76), Expect = 0.018
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Frame = +3
Query: 372 GGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS-MVAAAGFQHIRLYDLSSANPDP 548
G D TIKLW G L + N L T+ ++ GF + + +
Sbjct: 437 GTADRTIKLWNTQRGSMLHNIDTGSQVCNLLWSKQTNEFISTHGFMENEVALWNYPSVSR 496
Query: 549 VTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 653
V T + + V + NG + TG D T R W
Sbjct: 497 VGTLKGHTDRVLYLAMSPNGENIVTGAADETLRFW 531
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 34.7 bits (76), Expect = 0.018
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +3
Query: 390 IKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDPVTTFEDI 569
+ ++ S LRTM ++V L + + + + I +D+ AN + T +
Sbjct: 245 VDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQ-IGTLQGH 303
Query: 570 SKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 662
S V + ++ +G + +GG D +IWD R
Sbjct: 304 SSEVCGLAWRSDGLQLASGGNDNVVQIWDAR 334
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 33.9 bits (74), Expect = 0.032
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH--IRLYDLSSANP 542
+ +D TI+LW G C S V S+ ISP + +G + I+++++ N
Sbjct: 80 SASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNI-IGNC 138
Query: 543 DPVTTFEDISKNVSRVGFQKN--GTWMYTGGEDCTARIWD 656
T S VS V F N + G D ++WD
Sbjct: 139 KYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWD 178
Score = 31.9 bits (69), Expect = 0.13
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQ---HPDSQVNSLEISPT----SMVAAAGFQHIRLYDL 527
+G D TIK+W G C T+ H D V+ + SP + V+A + ++++DL
Sbjct: 122 SGSRDKTIKIWNI-IGNCKYTITDGGHSD-WVSCVRFSPNPDNLTFVSAGWDKAVKVWDL 179
Query: 528 SSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
+ + T+ + VS V +G+ +GG D T +WD
Sbjct: 180 ETFSLR--TSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD 220
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 33.5 bits (73), Expect = 0.042
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSAN-PD 545
T D T++ W +G C+R + + + + +V+ + IR+++ SS
Sbjct: 364 TASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSGKLLR 423
Query: 546 PVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
+ ED+ + V + N + +GG D T RIW+
Sbjct: 424 MLQGHEDLIRTV-----RFNDEKIVSGGYDGTVRIWN 455
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 33.1 bits (72), Expect = 0.055
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSS 533
+G YD+++++W SG + + + +VNSL + + A+ ++R++D S
Sbjct: 551 SGSYDNSVRIWDLRSGSPINIIP-MEKKVNSLRLYQGRLAVASDEPNVRIFDTVS 604
Score = 30.3 bits (65), Expect = 0.39
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 20/118 (16%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTM-----QHPDSQVNSLEISPT-------------SMVAA 494
TG D T++ W +G C++T+ + D+ + + +S T A
Sbjct: 451 TGADDKTVRQWDIVTGRCIQTLDFVWAETHDTSTSQILVSDTYKQEPFIRALDCLDAAVA 510
Query: 495 AGFQH--IRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 662
+G IR++DL P V +F + +S + F N +Y+G D + RIWD R
Sbjct: 511 SGTVDGLIRIWDLRIGLP--VRSFIGHTAPISSLQFDSNH--LYSGSYDNSVRIWDLR 564
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 32.7 bits (71), Expect = 0.073
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +3
Query: 558 FEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPRG 665
F SK V+ F KNG+ YTG D T WD G
Sbjct: 85 FPGHSKIVTTTTFDKNGSRFYTGSLDNTIHCWDLNG 120
Score = 31.9 bits (69), Expect = 0.13
Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 16/114 (14%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVC-LRTMQH-PDSQVNSLE-----------ISPTSMVAAAGFQH 509
T GYD T ++W + L H P+ L P + A
Sbjct: 215 TTGYDSTARIWDVNRTKSQLEVFVHVPEGSHTGLSRIPVTSCAWNPAKPDNFATAVLDGS 274
Query: 510 IRLYDLSSANPDPVTTFEDI---SKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 662
I+ + S PV +D + +S + F ++G ++ + GED R+WD R
Sbjct: 275 IQFWQKGSRTKRPVMKIKDAHLPQQGISCLSFSQDGNYLLSRGEDNALRVWDLR 328
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 32.7 bits (71), Expect = 0.073
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQH-IRLYDLSSANPD 545
T D +K W + G + ++ S +++ + +VA A IR+ D+ +
Sbjct: 506 TASLDGILKFWDFNKGNLIDSLDVGSSITHAIYQHSSDLVAVACDDFGIRIVDVQTRKI- 564
Query: 546 PVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD-PRG 665
V S ++ F G W+ T D T R WD P G
Sbjct: 565 -VRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPTG 604
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 570 SKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 662
S +V + NG + TGG+D TA++WD R
Sbjct: 300 SDSVLTGSWHPNGNILATGGQDTTAKVWDIR 330
Score = 31.1 bits (67), Expect = 0.22
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHS-GVCLRTMQHPDSQVNSLEISP--TSMVAAAGFQHIRLYDLSSAN 539
TGG D T K+W + G R + S V +L SP S+ ++L+D N
Sbjct: 317 TGGQDTTAKVWDIRALGKSFRNLGSQMSAVTNLCFSPLGESLAVTEQADFVQLFDTKLFN 376
Query: 540 PDPVTTFEDISKNVSRVGFQKNGTWMYTGGED 635
V D ++ + +G ++ G +D
Sbjct: 377 TSQVI---DFFGEIAGTAYSSSGDSLFIGVDD 405
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 30.7 bits (66), Expect = 0.29
Identities = 19/93 (20%), Positives = 43/93 (46%)
Frame = +3
Query: 375 GYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDPVT 554
G + ++KLW + C+RT++ S + +V+A + +YD++S++ +
Sbjct: 414 GANGSLKLWNKKTTSCIRTIECGYVLAASFINNDKCIVSAYKSGELEVYDIASSS--LIE 471
Query: 555 TFEDISKNVSRVGFQKNGTWMYTGGEDCTARIW 653
+ + + +GT+ T D T ++W
Sbjct: 472 RIQAHDGAIWDLAVGHDGTYFATASADHTVKLW 504
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +3
Query: 381 DHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYD 524
D ++ W S + ++ S+V +L + PT +V+ + IRL++
Sbjct: 639 DREVRYWDGKSFDLILKLRGHHSEVWALAVGPTFVVSGSHDHSIRLWE 686
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 30.7 bits (66), Expect = 0.29
Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 435 QHPDSQVNSLEISPTS--MVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSRVGFQKNG 608
Q P+ ++ L SP + + A++ +R+Y++ + + V V + ++G
Sbjct: 27 QPPEDSISDLAFSPQAEYLAASSWDSKVRIYEVQATGQSIGKALYEHQGPVLSVNWSRDG 86
Query: 609 TWMYTGGEDCTARIWD 656
T + +G D +A+++D
Sbjct: 87 TKVASGSVDKSAKVFD 102
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 29.9 bits (64), Expect = 0.52
Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVC-LRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPD 545
+GG D I LW V + + L+ S S V L + +
Sbjct: 67 SGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQ 126
Query: 546 PVTTFEDISKNVSRVGFQKNGTWMYTG-GEDCTARIWDPR 662
+ + + V+ + K G+ + T +DCT ++WD R
Sbjct: 127 KIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSR 166
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +3
Query: 381 DHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQ-HIRLYDLSSANPDPVTT 557
D T+K+W + S C++T++ + V G I+++DL + + V
Sbjct: 157 DCTMKVWDSRSKDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLK 216
Query: 558 -FEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
+DI ++ + K+G+ + + D T RI+D
Sbjct: 217 GHKDI---ITSLAISKDGSSLLSNSMDNTVRIFD 247
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 29.9 bits (64), Expect = 0.52
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Frame = +3
Query: 369 TGGYDHTIKLW---QAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSAN 539
T D IKLW ++ S + R V P VAA ++ +D+
Sbjct: 152 TASQDGLIKLWDYKESSSTITFRGNSEAARDVVFSPSEPNEFVAAYDSGILQKWDIRFPK 211
Query: 540 PDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
P + V V + NG ++ + G D T RIWD
Sbjct: 212 L-PFLKLAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWD 249
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 29.9 bits (64), Expect = 0.52
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Frame = +3
Query: 375 GYDHTIKLWQAHSG--VCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSANPDP 548
G DHTIK W +G V + + P V L ++ + +HI ++D + +
Sbjct: 288 GQDHTIKTWDLITGQNVDSKITKAPLLCVEKL-TDLHLVICGSSARHIVVHDPRAGSDKI 346
Query: 549 VTTFEDISKN-VSRVGFQKNGTWMYTG-GEDCTARIWDPR 662
V+ KN VS + +M+ D T R+WD R
Sbjct: 347 VSHTLSGHKNLVSGLSASPENPYMFASVSHDNTCRVWDVR 386
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 29.1 bits (62), Expect = 0.90
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL 464
TG D IK+W +SG C+ T S V+ L
Sbjct: 356 TGADDGKIKVWDMNSGFCIVTFTQHTSAVSGL 387
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 444 DSQVNSLEISPT-SMVAAAGFQH-IRLYDLSSANPDPVTTFEDISKNVSRVGFQKNGTWM 617
D VN PT ++ +AG ++L+ ++++ V T NVS F + +
Sbjct: 212 DRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELI 271
Query: 618 YTGGEDCTARIWD 656
+ ED T R+WD
Sbjct: 272 LSASEDKTIRVWD 284
Score = 26.2 bits (55), Expect = 6.3
Identities = 20/100 (20%), Positives = 37/100 (37%)
Frame = +3
Query: 357 WL*XTGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLYDLSSA 536
W+ T ++ I+LW G L D V + PT + +G ++ +
Sbjct: 25 WI-LTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYK 83
Query: 537 NPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
+ + + V F W+ + +D T RIW+
Sbjct: 84 SRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWN 123
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 28.7 bits (61), Expect = 1.2
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTS---MVAAA-GFQHIRLYDLSSA 536
+ +DHT+K+W + T D + S SP + ++A A IRL D+ S
Sbjct: 121 SSSFDHTLKVWDVSTLQEAYTFTMED-MIYSHAWSPIASHCLIATAYRSSSIRLCDMQSG 179
Query: 537 NPDPVTTFEDISKNVSRVGF-QKNGTWMYTGGEDCTARIWDPR 662
+ + + NV V + KN + +G D T R+WD R
Sbjct: 180 S--YTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIR 220
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 411 SGVCLRTMQHPDSQVNSL-EISPTSMVAAAGFQHIRLYDLSSANPDPVTTFEDISKNVSR 587
+G+C + + D +N L E+S S +L+D S +P E I+ ++++
Sbjct: 754 NGLCTQE-EVEDIAINWLDEVSDLSSDHLGNTVVQKLFDYCS-DPVKEMMLERIAPHLAQ 811
Query: 588 VGFQKNGTW 614
+G KNGTW
Sbjct: 812 IGIHKNGTW 820
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 561 EDISKNVSRVGFQKNGTWMYTGGEDCTARIWDPR 662
E++ ++ +Q G TGG D ++WD R
Sbjct: 543 EEVDAGINMAQWQPKGNLFVTGGSDGIVKVWDLR 576
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 579 VSRVGFQKNGTWMYTGGEDCTARIWDPRG 665
+S + F K ++YTG D ++WD G
Sbjct: 302 ISDLCFSKGNLFLYTGAFDNAVKVWDMEG 330
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 28.3 bits (60), Expect = 1.6
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSL-EISPTSM-VAAAGFQHIRLYDLSSANP 542
+GG D I +W+ T+ P V+ + E+ S V + L+S++
Sbjct: 99 SGGDDSKIMIWKVPEDY---TVMEPYEDVHPIAELKGHSRKVGLVQYHPTAANVLASSSA 155
Query: 543 DPVTTFEDISKNVSRVG-----------FQKNGTWMYTGGEDCTARIWDPR 662
D D K V+ V F +GT + T D R+WDPR
Sbjct: 156 DNTIKLWDCEKGVAHVSLKMDVMCQSMSFNADGTRLVTTSRDKKVRVWDPR 206
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +3
Query: 468 ISPTSMVAAAGFQH--IRLYDLSSAN----PDPVTTFEDISKNVSRVGFQKN 605
+ P++ A G + + +YDL ++N P PVTT ++I+ +++ + F ++
Sbjct: 400 LDPSNKYLAIGSKSGIVNIYDLQTSNADAAPKPVTTLDNITFSINSMSFSQD 451
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +3
Query: 435 QHPDSQVNSLEISP--TSMVAAAGFQHIR-LYDLSSANPDPVTTFEDISKNVSRVGFQKN 605
+H DS V S+ I+P +++ A+ G + ++D+++ + + ++ + + +
Sbjct: 59 EHKDS-VFSVSINPVHSNLCASGGGDDLGYIWDITTG--EQICQLTGHKDSIVAIDWSFD 115
Query: 606 GTWMYTGGEDCTARIW 653
GT++ TGG D R+W
Sbjct: 116 GTYIATGGMDSQVRLW 131
Score = 27.1 bits (57), Expect = 3.6
Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAGFQ--HIRLYDLSSANP 542
TGG D ++LW++ +G T ++ L P + AAG I ++ L S
Sbjct: 121 TGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSWHPKGLFLAAGCNDGSIWMWSLPSGKV 180
Query: 543 DPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWDP 659
V N + G + T + T +W+P
Sbjct: 181 VQVMYGHTAPVNAGKFIPPGVGKRLATVDDSGTLIVWNP 219
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 471 RSPSCSLANLDAALFVNKHHC 409
R+ +CSL + LF KHHC
Sbjct: 62 RTNNCSLCETEFTLFRRKHHC 82
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 381 DHTIKLWQAHSGVCLRTMQHPDSQVNSLEI--SPTSMVAAAGFQHIRLYDLSS 533
D I +W +H+G L T + + + +I S T MV+ A +RL+D+ +
Sbjct: 31 DKVINVWFSHNGERLGTYEGHTGAIWTCDINKSSTLMVSGAADNTMRLWDVKT 83
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 531 SANPDPVTTFEDISKNVSRVGFQKNGTWMYTGGEDCTARIWD 656
S N + + T+E + + K+ T M +G D T R+WD
Sbjct: 39 SHNGERLGTYEGHTGAIWTCDINKSSTLMVSGAADNTMRLWD 80
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 369 TGGYDHTIKLWQAHSGVCLRTMQHPDSQVNSLEISPTSMVAAAG 500
T D+TI++W +G L T+ P S + + + P+ V G
Sbjct: 194 TASEDNTIRIWDVSTGNLLTTIALP-STPSCMTVDPSERVVYVG 236
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Frame = +3
Query: 381 DHTIKLWQAH--SGVCLRTM-QHPD--SQVNSLEISPTSMVAAAG 500
D T+KLW+ H + CL T+ +H D +V+ + S + +VA+ G
Sbjct: 100 DSTVKLWKPHVLNASCLSTIGEHTDYVKRVSIPKYSKSPLVASGG 144
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 27.1 bits (57), Expect = 3.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 603 NGTWMYTGGEDCTARIWD 656
+G W+ +GG+D RIW+
Sbjct: 390 SGNWLASGGDDGVLRIWE 407
>SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 521
Score = 26.6 bits (56), Expect = 4.8
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = -2
Query: 659 GIPYPGCAVLTSCVHPSAIFLKPNSRYVFGDVLKSCDRVWIGTTKII*PYMLKSSCCYHR 480
GIP+ GC V +S + + K +S +FG S V+ GT I +L S CYHR
Sbjct: 380 GIPWVGCLVTSSFGLLAFMNTKSSSATIFG-YFSSAVTVF-GTINWI--NILLSYICYHR 435
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.8 bits (54), Expect = 8.4
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +2
Query: 227 EISKLPGSWK*KNVLLRNKYANCLNNKFHKMAGDTTASLGGSQVALXN---RRLRSY 388
EI + P W+ N YA L + HK+ G+T S Q N RRL SY
Sbjct: 765 EIHEFPSEWE-------NDYAPFLLKEHHKVIGETYVSSFDIQQGCFNVIKRRLSSY 814
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,898,733
Number of Sequences: 5004
Number of extensions: 86134
Number of successful extensions: 371
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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