Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E18
         (900 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    27   0.78 
AY745206-1|AAU93473.1|   91|Anopheles gambiae cytochrome P450 pr...    23   9.6  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   9.6  
AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    23   9.6  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   9.6  

>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 27.1 bits (57), Expect = 0.78
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 414 GVCLRTMQHPDSQVNSLEISPTSMVAAAGFQHIRLY 521
           GVCLR   +P ++     ISP    A   F HI L+
Sbjct: 69  GVCLRLQSNPQNKEQFFGISPERGFADFVFAHIILH 104


>AY745206-1|AAU93473.1|   91|Anopheles gambiae cytochrome P450
           protein.
          Length = 91

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 12/37 (32%), Positives = 14/37 (37%)
 Frame = -2

Query: 755 PLSGTDQDEALLHSPELELGISFDTXVRGAAPGIPYP 645
           PL G   DE     PE+ +   FD       P   YP
Sbjct: 12  PLLGISMDEKYFPEPEVYMPQRFDEQAPNYDPDAYYP 48


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 640 QPGYGIPG 663
           QPGYGIPG
Sbjct: 499 QPGYGIPG 506


>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 860 WINSYVLNRRLRFWYQC 810
           W+ SY+ NRR R    C
Sbjct: 100 WLESYLTNRRYRVKVDC 116


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 522 DLSSANPDPVTTFEDISKNVSR 587
           D+   N DP+ T EDI K + R
Sbjct: 394 DVLITNIDPLATEEDIKKAIER 415


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 992,861
Number of Sequences: 2352
Number of extensions: 21369
Number of successful extensions: 53
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)