Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E16
         (882 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81113-1|CAB03278.1|  236|Caenorhabditis elegans Hypothetical pr...   248   4e-66
Z82259-3|CAB05127.1|  368|Caenorhabditis elegans Hypothetical pr...    31   0.83 
U88308-6|AAB42320.1|  180|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AF125952-1|AAD14701.1|  571|Caenorhabditis elegans Hypothetical ...    28   7.7  
AC006722-7|AAK68412.2|  544|Caenorhabditis elegans Hypothetical ...    28   7.7  
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z81113-1|CAB03278.1|  236|Caenorhabditis elegans Hypothetical
           protein T03F6.1 protein.
          Length = 236

 Score =  248 bits (607), Expect = 4e-66
 Identities = 117/224 (52%), Positives = 155/224 (69%), Gaps = 2/224 (0%)
 Frame = +1

Query: 73  MATGRIVVYGGRGALGAACVNHFKSFNYWVANIDLNPNEKADFNITVPKDASWVEQEDHV 252
           M++G+++VYGG+GALG+A +  FK   Y V NIDL+ N++AD NI V  + +W EQE  +
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSI 60

Query: 253 VNELGNALQGQKVNAIICVAGGWAGGNAA-KDLSKQADLMWRQSVWSSSIAATLAAKYXX 429
           + +  ++LQG +V+ + CVAGGWAGG+A+ KD  K ADLM +QSVWSS+IAA LA  +  
Sbjct: 61  LEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK 120

Query: 430 XXXXXXXXXXXXXXXXXPGMIGYGMAKAAVHQLTKSLGAKDSGLPENSLAVAIMPVTLDT 609
                            P MIGYGMAKAAVH LT SL AKDSGLP+NS  + IMPVTLDT
Sbjct: 121 PGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDT 180

Query: 610 EMNRKWMPKADFSTWTPLTFVAELFEKWMKD-EGRPANGSLVAL 738
            MNRKWMP AD S+WTPL+F++E   KW  +   RP++G+L+ +
Sbjct: 181 PMNRKWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKI 224


>Z82259-3|CAB05127.1|  368|Caenorhabditis elegans Hypothetical
           protein C28D4.3 protein.
          Length = 368

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = -1

Query: 153 IKRFKMVHAGSTQCPTTTVHDDSTGSHYNVFSRSTN---QNLKEFPIVN 16
           I  F  + A  T+C  T V  D TG H    +R+ N   Q L E+PI N
Sbjct: 17  IDHFMGLPAHPTKCQATYVWIDGTGEHLRAKTRTINTKPQYLSEYPIWN 65


>U88308-6|AAB42320.1|  180|Caenorhabditis elegans Hypothetical
           protein C32E8.3 protein.
          Length = 180

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 604 DTEMNRKWMPKADFSTWTPLTFVAELFEKWMKDEG 708
           D ++ ++W     F   T      + F+KW+KD G
Sbjct: 11  DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAG 45


>AF125952-1|AAD14701.1|  571|Caenorhabditis elegans Hypothetical
           protein C01B4.9 protein.
          Length = 571

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -2

Query: 725 LPFAGRPSSFIHFSNNSATKVSGVHVLKSAFGIHFLFISVSNVTG--IIATANEFSG 561
           +PF+   + F    +    ++ GV  L +AFGI  +F+ +  V G  I A   + +G
Sbjct: 466 IPFSAGVACFAALRSVICVELIGVEKLSNAFGILMVFMGIGAVVGGPIAAQIKDITG 522


>AC006722-7|AAK68412.2|  544|Caenorhabditis elegans Hypothetical
           protein Y19D10A.12 protein.
          Length = 544

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -2

Query: 725 LPFAGRPSSFIHFSNNSATKVSGVHVLKSAFGIHFLFISVSNVTG--IIATANEFSG 561
           +PF+   + F    +    ++ GV  L +AFGI  +F+ +  V G  I A   + +G
Sbjct: 439 IPFSAGVACFAALRSVICVELIGVEKLSNAFGILMVFMGIGAVVGGPIAAQIKDITG 495


>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
           protein H43E16.1 protein.
          Length = 1203

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = -1

Query: 198 ISFFVGIQINVSDPIIKRFKMVHAGSTQCPTTTVHDDSTGSHYNVFSRSTNQN 40
           ISF VGI + +   II     +  G++ CPT       T  + N+FS ST  N
Sbjct: 14  ISFAVGI-VGLVVGIIGIVLAIVFGTSSCPTCNTCPTQTQCNTNLFSISTQVN 65


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,830,288
Number of Sequences: 27780
Number of extensions: 383448
Number of successful extensions: 981
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)