Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E15
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0082 + 20749425-20749589,20750137-20750238,20750320-207503...    37   0.025
05_01_0299 - 2322204-2322734,2324089-2326164                           30   2.8  
04_03_0554 - 17075142-17075159,17075788-17076591,17076619-170767...    29   5.0  

>09_06_0082 +
           20749425-20749589,20750137-20750238,20750320-20750384,
           20750471-20750588,20750937-20751012,20751304-20751365,
           20751457-20751588,20751686-20751739,20751969-20752034,
           20752115-20752189,20752271-20752321
          Length = 321

 Score = 36.7 bits (81), Expect = 0.025
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +1

Query: 772 VXFSYWDGSGHRRIVTXKKG 831
           + +SYWDG+GHRR++  +KG
Sbjct: 181 ITYSYWDGTGHRRVIQVRKG 200



 Score = 29.1 bits (62), Expect = 5.0
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
 Frame = +2

Query: 188 YKGAASEAGRAMHLMKKREKAQQEIELRKKKIEED----LKIDNIENKFAT----HYD-- 337
           Y G A +A +   L K+RE  +++IE  K K  +     L+  +  ++  T     YD  
Sbjct: 8   YVGTAQDAVKIRRLEKQREAERRKIEELKNKSSDGQPGLLQFGSSTSEKLTPNSMDYDFQ 67

Query: 338 AVEQQLKSSTIGLVTLDEMKAKQEHI 415
            +E   K  T+GLVT ++   K+ +I
Sbjct: 68  ILETAFKKETVGLVTREQYVEKRVNI 93


>05_01_0299 - 2322204-2322734,2324089-2326164
          Length = 868

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = +2

Query: 230 MKKREKAQQEIELRKKKIEEDLKIDNIENKFATHYDAVEQQLKSSTIGLVTL 385
           ++K+E+ Q E  LR ++    LK +N   ++ +   A+EQQ+    + L +L
Sbjct: 711 LEKKERDQIETSLRSEENFLHLKAENDTQRYKSQIRALEQQISQLKVSLDSL 762


>04_03_0554 -
           17075142-17075159,17075788-17076591,17076619-17076719,
           17077095-17077751,17077827-17078768,17078837-17078896,
           17079131-17079763,17079886-17079942,17080177-17080702
          Length = 1265

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +2

Query: 221 MHLMKKREKAQQEIELRKKKIEEDLK-IDNIENKF-ATHYDAVEQQLKSSTIGLVTLDEM 394
           M L +K EK ++  E  K+   +DL  + N+E    ATH    EQ++ S   G +   E 
Sbjct: 231 MTLQEKEEKLKKRREAYKRN--KDLNALANVEEPLHATHSGQAEQEIASQDKGSIPKQEK 288

Query: 395 KA 400
           KA
Sbjct: 289 KA 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,904,390
Number of Sequences: 37544
Number of extensions: 170423
Number of successful extensions: 650
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)